Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G316200.1 | Wheat | nucleus, plastid | 95.45 | 94.79 |
| HORVU4Hr1G080160.1 | Barley | plastid | 91.26 | 91.9 |
| TraesCS4A01G415400.1 | Wheat | nucleus | 91.61 | 90.66 |
| EER92849 | Sorghum | mitochondrion | 62.94 | 73.47 |
| Zm00001d027679_P001 | Maize | cytosol, nucleus | 62.59 | 73.36 |
| Os03t0149100-01 | Rice | mitochondrion | 66.43 | 73.36 |
| GSMUA_Achr4P25190_001 | Banana | mitochondrion | 37.41 | 50.0 |
| VIT_07s0005g03020.t01 | Wine grape | mitochondrion, nucleus | 39.86 | 49.14 |
| KRG95645 | Soybean | mitochondrion, nucleus | 35.66 | 49.04 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 38.46 | 47.41 |
| KRH67348 | Soybean | nucleus | 34.97 | 47.17 |
| KRH19530 | Soybean | mitochondrion, nucleus | 38.11 | 45.99 |
| TraesCS4D01G001700.1 | Wheat | mitochondrion | 34.62 | 45.62 |
| GSMUA_Achr11P... | Banana | mitochondrion | 33.57 | 45.5 |
| KRH32157 | Soybean | mitochondrion, nucleus | 37.76 | 45.19 |
| TraesCS4D01G312700.1 | Wheat | plastid | 29.37 | 44.92 |
| TraesCS6D01G382600.1 | Wheat | plastid | 32.17 | 44.02 |
| PGSC0003DMT400025142 | Potato | nucleus | 37.41 | 43.67 |
| GSMUA_Achr8P14330_001 | Banana | mitochondrion | 35.66 | 43.59 |
| Solyc09g066270.2.1 | Tomato | nucleus | 37.06 | 43.44 |
| TraesCS7D01G229900.1 | Wheat | cytosol, nucleus, plastid | 30.07 | 37.55 |
| TraesCS4D01G225200.1 | Wheat | nucleus | 32.52 | 35.77 |
| TraesCS4D01G341500.1 | Wheat | cytosol, mitochondrion, nucleus | 19.23 | 31.79 |
| TraesCS3D01G308000.1 | Wheat | mitochondrion | 27.27 | 31.71 |
| TraesCS5D01G291300.1 | Wheat | nucleus | 19.58 | 29.63 |
| TraesCS1D01G110300.1 | Wheat | cytosol, mitochondrion, nucleus | 19.23 | 26.07 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G312800.1 | EnsemblPlantsGene:TraesCS4D01G312800 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31529 |
| PANTHER:PTHR31529:SF4 | PFAM:PF03195 | PFscan:PS50891 | SEG:seg | MapMan:15.5.24 | : |
Description
No Description!
Coordinates
chr4D:-:478998478..478999338
Molecular Weight (calculated)
30352.3 Da
IEP (calculated)
7.213
GRAVY (calculated)
-0.357
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MALGRPLHSN HPQQQQRSPR HRRETTQSVR SPSDPAIITG RLMSMTGLGS PCGACKFLRR KCARGCVFAP YFCHEQGAAH FAAIHKVFGA SNVSKLLAHL
101: PISDRAEAAV TVSYEAQARL RDPVYGCVAH IFALQQQVMT LQAQLASLKA HAPPAPQGMQ HQDDVKGYVG GGAADQYAHG GYQWHNGNGV GAAAAQQQCA
201: YGGNGGATAG HDSISALLAG SAASDYMMYH ALEQSASDDD GHAAVAAFEV AEQSSFGTEE SGWRSSSGYQ DCEDLQSVAY AYLNRS
101: PISDRAEAAV TVSYEAQARL RDPVYGCVAH IFALQQQVMT LQAQLASLKA HAPPAPQGMQ HQDDVKGYVG GGAADQYAHG GYQWHNGNGV GAAAAQQQCA
201: YGGNGGATAG HDSISALLAG SAASDYMMYH ALEQSASDDD GHAAVAAFEV AEQSSFGTEE SGWRSSSGYQ DCEDLQSVAY AYLNRS
001: MTSSSSSSGS PCGACKFLRR KCAKGCVFAP YFCHEQGASH FAAIHKVFGA SNASKLLSHL PISDRCEAAI TISYEAQARL QDPIYGCVSH IFALQQQVVN
101: LQAELEILKQ QAAQSMIFAD SPTSENPNSY YGDTTKAPYH HDHQNIYHHH DQTHLVYQTG SSGTVQHGDA TESSYHNETS SGMGEFSIYS DLEQHLNTFN
201: QDHLKELQSA NFGYISFS
101: LQAELEILKQ QAAQSMIFAD SPTSENPNSY YGDTTKAPYH HDHQNIYHHH DQTHLVYQTG SSGTVQHGDA TESSYHNETS SGMGEFSIYS DLEQHLNTFN
201: QDHLKELQSA NFGYISFS
Arabidopsis Description
LBD29LBD29 [Source:UniProtKB/TrEMBL;Acc:A0A178VM67]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.