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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 4
  • cytosol 1
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G295100.1 Wheat nucleus 93.09 99.13
HORVU3Hr1G075370.2 Barley nucleus 91.06 96.14
Os01t0772100-01 Rice mitochondrion 67.48 67.76
EES01535 Sorghum plastid 54.47 60.09
Zm00001d043311_P001 Maize plastid 51.22 57.01
TraesCS4D01G312700.1 Wheat plastid 30.08 39.57
TraesCS4D01G341500.1 Wheat cytosol, mitochondrion, nucleus 24.39 34.68
TraesCS4D01G001700.1 Wheat mitochondrion 30.08 34.1
TraesCS6D01G382600.1 Wheat plastid 28.46 33.49
TraesCS5D01G291300.1 Wheat nucleus 25.61 33.33
TraesCS4D01G225200.1 Wheat nucleus 32.93 31.15
TraesCS7D01G229900.1 Wheat cytosol, nucleus, plastid 27.64 29.69
TraesCS4D01G312800.1 Wheat plastid 31.71 27.27
TraesCS1D01G110300.1 Wheat cytosol, mitochondrion, nucleus 21.95 25.59
Protein Annotations
EnsemblPlants:TraesCS3D01G308000.1EnsemblPlantsGene:TraesCS3D01G308000InterPro:IPR004883InterPro:LOBPANTHER:PTHR31529PANTHER:PTHR31529:SF8
PFAM:PF03195PFscan:PS50891SEG:segMapMan:15.5.24::
Description
No Description!
Coordinates
chr3D:+:421666532..421667356
Molecular Weight (calculated)
26444.3 Da
IEP (calculated)
8.004
GRAVY (calculated)
-0.322
Length
246 amino acids
Sequence
(BLAST)
001: MYAVRACVRM RSAMQEEPAP PRKRGGAVHG SAAREQQQQQ QADETSSSAG PGAPCGACKF LRRRCVPGCV FAPHFSGSGR ERGAAQFAAV HRVFGASNVA
101: KLLSRVPVAL RRDTARTVCY EAQARIADPV YGCVGTILAL QHQVALLQGQ LSVLQTQLFN CRLALASTHP DSAEQLAVLQ PAYSAASAPS QMVNYDDLPQ
201: AVDFMDVEPQ MRGLESLQLS QPPHRDEDES QGVSPFSDNA GGQRQL
Best Arabidopsis Sequence Match ( AT3G03760.1 )
(BLAST)
001: MADQQRGHNT SDSRRKSLAG KRTSQQTPTS SLSSGGVSMA AATTGTGTAS PCGACKFLRR KCVSGCIFAP HFGSDQGAAR FAAVHKVFGA SNVSKLLHHI
101: PVNRRHDAVV TISYEAQARL SDPVYGCVST ILALQQQVAS LQAELSVVQS QLINSRVAMA NVMQQQTHHQ QQQQQLVVMQ QPEYSNNSSA STTLAGAAMN
201: SFTMTADAAA VSYDVMAPTN LEHSLQPMPP HQQRRGDYQH EDEEESGADF SVAVGSTAVA SKVIFPAEDF HRR
Arabidopsis Description
LBD20LOB domain-containing protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV3]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.