Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc06g064540.1.1 | Tomato | mitochondrion, plastid | 72.73 | 59.46 |
CDX83633 | Canola | cytosol, mitochondrion, nucleus, plastid | 49.59 | 51.28 |
AT3G26660.1 | Thale cress | mitochondrion | 51.24 | 51.24 |
AT3G26620.1 | Thale cress | mitochondrion | 51.24 | 51.24 |
CDX75748 | Canola | cytosol, mitochondrion, nucleus | 50.41 | 50.83 |
CDX82498 | Canola | cytosol, nucleus, plastid | 50.41 | 50.41 |
CDY13647 | Canola | cytosol, mitochondrion, nucleus, plastid | 49.59 | 49.59 |
CDY28537 | Canola | mitochondrion | 48.76 | 48.76 |
CDY48982 | Canola | mitochondrion | 47.93 | 47.93 |
KRH14351 | Soybean | mitochondrion | 56.2 | 47.55 |
KRH59547 | Soybean | mitochondrion, nucleus, plastid | 52.89 | 44.76 |
VIT_16s0100g00440.t01 | Wine grape | mitochondrion | 56.2 | 44.44 |
GSMUA_Achr11P... | Banana | mitochondrion | 50.41 | 38.85 |
Bra025217.1-P | Field mustard | cytosol | 33.06 | 37.38 |
HORVU5Hr1G075950.1 | Barley | cytosol, nucleus | 24.79 | 34.48 |
Zm00001d034384_P001 | Maize | plastid | 43.8 | 32.32 |
EER93325 | Sorghum | plastid | 45.45 | 30.56 |
TraesCS4B01G346500.1 | Wheat | cytosol, mitochondrion, nucleus | 42.15 | 30.36 |
Solyc01g091400.2.1 | Tomato | plastid | 41.32 | 29.94 |
TraesCS5A01G515300.1 | Wheat | cytosol | 43.8 | 29.61 |
TraesCS4D01G341500.1 | Wheat | cytosol, mitochondrion, nucleus | 42.15 | 29.48 |
HORVU4Hr1G084750.2 | Barley | cytosol, nucleus | 41.32 | 28.25 |
TraesCS5A01G284000.1 | Wheat | nucleus | 43.8 | 28.19 |
TraesCS5D01G291300.1 | Wheat | nucleus | 42.98 | 27.51 |
TraesCS5B01G282700.1 | Wheat | nucleus | 42.98 | 27.37 |
Solyc03g095940.1.1 | Tomato | plastid | 38.02 | 27.06 |
Os08t0517100-01 | Rice | cytosol, nucleus, plastid | 20.66 | 26.32 |
Zm00001d031544_P001 | Maize | plastid | 44.63 | 26.21 |
OQU80868 | Sorghum | peroxisome | 42.98 | 25.87 |
Solyc06g083930.1.1 | Tomato | nucleus | 40.5 | 25.0 |
TraesCS1D01G110300.1 | Wheat | cytosol, mitochondrion, nucleus | 39.67 | 22.75 |
Solyc09g066260.2.1 | Tomato | nucleus | 42.15 | 22.17 |
Solyc01g098220.1.1 | Tomato | nucleus | 38.84 | 19.5 |
Bra032938.1-P | Field mustard | nucleus | 45.45 | 18.71 |
Solyc09g066270.2.1 | Tomato | nucleus | 35.54 | 17.62 |
Solyc01g091420.1.1 | Tomato | plastid | 38.84 | 17.34 |
Protein Annotations
EnsemblPlants:Solyc01g109240.1.1 | EnsemblPlantsGene:Solyc01g109240.1 | InterPro:IPR004883 | InterPro:LOB | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF13 |
PFAM:PF03195 | PFscan:PS50891 | UniParc:UPI0002768803 | UniProt:K4B3D7 | MapMan:15.5.24 | : |
Description
No Description!
Coordinates
chr1:+:96243824..96244293
Molecular Weight (calculated)
14015.9 Da
IEP (calculated)
8.266
GRAVY (calculated)
-0.247
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTRCAACK QLRRKCPSNC IFLPYFPPNN PQRFLYVHRI YGASNVGKML QQVEEHQRGD VADSLYYEAY CRIKNPVYGC VGIITVLHEE IYHVQCQLAK
101: VQAQIDLLYQ NGLYTLDPSF Y
101: VQAQIDLLYQ NGLYTLDPSF Y
001: MNPKRCAACK YLRRRCPKDC VFSPYFPPND PQKFACVHRI YGAGNVSKML QQLPDQTRAE AVESLCFEAK CRVDDPVYGC VGIIHLLKTQ IQKTQNELAK
101: TQAEIAVAQT KLSQTQNSDF M
101: TQAEIAVAQT KLSQTQNSDF M
Arabidopsis Description
LBD24LOB domain-containing protein 24 [Source:UniProtKB/Swiss-Prot;Acc:P59468]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.