Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034384_P001 | Maize | plastid | 75.56 | 82.93 |
| CDX83633 | Canola | cytosol, mitochondrion, nucleus, plastid | 35.0 | 53.85 |
| CDY13647 | Canola | cytosol, mitochondrion, nucleus, plastid | 35.56 | 52.89 |
| AT3G26660.1 | Thale cress | mitochondrion | 35.0 | 52.07 |
| CDX75748 | Canola | cytosol, mitochondrion, nucleus | 34.44 | 51.67 |
| AT3G26620.1 | Thale cress | mitochondrion | 34.44 | 51.24 |
| CDX82498 | Canola | cytosol, nucleus, plastid | 33.89 | 50.41 |
| GSMUA_Achr11P... | Banana | mitochondrion | 42.78 | 49.04 |
| CDY28537 | Canola | mitochondrion | 32.22 | 47.93 |
| CDY48982 | Canola | mitochondrion | 31.67 | 47.11 |
| Solyc01g109240.1.1 | Tomato | mitochondrion | 30.56 | 45.45 |
| Bra025217.1-P | Field mustard | cytosol | 25.56 | 42.99 |
| KRH59547 | Soybean | mitochondrion, nucleus, plastid | 33.89 | 42.66 |
| KRH14351 | Soybean | mitochondrion | 32.22 | 40.56 |
| OQU80868 | Sorghum | peroxisome | 43.89 | 39.3 |
| VIT_16s0100g00440.t01 | Wine grape | mitochondrion | 31.67 | 37.25 |
| Solyc06g064540.1.1 | Tomato | mitochondrion, plastid | 30.56 | 37.16 |
| EER95498 | Sorghum | cytosol, nucleus, plastid | 26.11 | 27.98 |
| EES07771 | Sorghum | plastid | 29.44 | 24.65 |
| EES14059 | Sorghum | mitochondrion | 28.33 | 23.72 |
| EES01535 | Sorghum | plastid | 27.78 | 22.42 |
| KXG38649 | Sorghum | plastid | 30.0 | 20.77 |
| EER92849 | Sorghum | mitochondrion | 27.78 | 20.41 |
| EER92557 | Sorghum | nucleus | 31.11 | 20.29 |
| Bra032938.1-P | Field mustard | nucleus | 29.44 | 18.03 |
| OQU88465 | Sorghum | nucleus | 30.0 | 5.77 |
Protein Annotations
| EnsemblPlants:EER93325 | EnsemblPlantsGene:SORBI_3001G062800 | EntrezGene:8061193 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil |
| PANTHER:PTHR31301 | PANTHER:PTHR31301:SF56 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:EER93325 | ProteinID:EER93325.1 |
| RefSeq:XP_002466327.1 | SEG:seg | UniParc:UPI0001A82B6C | UniProt:C5WY44 | MapMan:15.5.24 | : |
Description
hypothetical protein
Coordinates
chr1:-:4698137..4699057
Molecular Weight (calculated)
19092.7 Da
IEP (calculated)
8.409
GRAVY (calculated)
-0.214
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSATNTEA AAASSSPGKR CAACKNQRRK CGHDCVLAPY FPASDPQRYA CVQRVFGASN VARMLQNLPV HERARAADTM AMEARRRVQD PVYGCAGIVG
101: RLQGEIRAAQ CELARTQAQI AVHAAAAAVR ARPAPAVDAL AAGQHAPAAP LQQQDDDAAF QGLDALLIDD CRWDGLARLL
101: RLQGEIRAAQ CELARTQAQI AVHAAAAAVR ARPAPAVDAL AAGQHAPAAP LQQQDDDAAF QGLDALLIDD CRWDGLARLL
001: MNPKRCAACK YLRRRCPKDC VFSPYFPPND PQKFACVHRI YGAGNVSKML QQLPDQTRAE AVESLCFEAK CRVDDPVYGC VGIIHLLKTQ IQKTQNELAK
101: TQAEIAVAQT KLSQTHISDF M
101: TQAEIAVAQT KLSQTHISDF M
Arabidopsis Description
LBD23LOB domain-containing protein 23 [Source:UniProtKB/Swiss-Prot;Acc:P59467]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.