Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28537 | Canola | mitochondrion | 97.52 | 97.52 |
| CDX83633 | Canola | cytosol, mitochondrion, nucleus, plastid | 80.99 | 83.76 |
| CDY13647 | Canola | cytosol, mitochondrion, nucleus, plastid | 83.47 | 83.47 |
| AT3G26660.1 | Thale cress | mitochondrion | 81.82 | 81.82 |
| CDX82498 | Canola | cytosol, nucleus, plastid | 81.82 | 81.82 |
| AT3G26620.1 | Thale cress | mitochondrion | 80.99 | 80.99 |
| CDX75748 | Canola | cytosol, mitochondrion, nucleus | 78.51 | 79.17 |
| Solyc01g109240.1.1 | Tomato | mitochondrion | 47.93 | 47.93 |
| KRH14351 | Soybean | mitochondrion | 54.55 | 46.15 |
| Solyc06g064540.1.1 | Tomato | mitochondrion, plastid | 53.72 | 43.92 |
| VIT_16s0100g00440.t01 | Wine grape | mitochondrion | 53.72 | 42.48 |
| KRH59547 | Soybean | mitochondrion, nucleus, plastid | 49.59 | 41.96 |
| CDY35378 | Canola | cytosol, nucleus, plastid | 35.54 | 41.75 |
| GSMUA_Achr11P... | Banana | mitochondrion | 52.07 | 40.13 |
| Bra032938.1-P | Field mustard | nucleus | 95.04 | 39.12 |
| TraesCS4D01G341500.1 | Wheat | cytosol, mitochondrion, nucleus | 50.41 | 35.26 |
| TraesCS4B01G346500.1 | Wheat | cytosol, mitochondrion, nucleus | 48.76 | 35.12 |
| Zm00001d034384_P001 | Maize | plastid | 46.28 | 34.15 |
| TraesCS5A01G515300.1 | Wheat | cytosol | 50.41 | 34.08 |
| HORVU4Hr1G084750.2 | Barley | cytosol, nucleus | 48.76 | 33.33 |
| Os08t0517100-01 | Rice | cytosol, nucleus, plastid | 25.62 | 32.63 |
| HORVU5Hr1G075950.1 | Barley | cytosol, nucleus | 23.14 | 32.18 |
| EER93325 | Sorghum | plastid | 47.11 | 31.67 |
| TraesCS5A01G284000.1 | Wheat | nucleus | 47.11 | 30.32 |
| TraesCS5D01G291300.1 | Wheat | nucleus | 47.11 | 30.16 |
| TraesCS5B01G282700.1 | Wheat | nucleus | 46.28 | 29.47 |
| CDY57108 | Canola | mitochondrion | 39.67 | 26.97 |
| CDY37038 | Canola | mitochondrion | 39.67 | 26.97 |
| CDX74738 | Canola | cytosol, nucleus, plastid | 41.32 | 26.6 |
| TraesCS1D01G110300.1 | Wheat | cytosol, mitochondrion, nucleus | 45.45 | 26.07 |
| CDY68561 | Canola | cytosol, nucleus, plastid | 40.5 | 26.06 |
| CDY00994 | Canola | plastid | 36.36 | 25.73 |
| CDY08551 | Canola | plastid | 36.36 | 25.58 |
| OQU80868 | Sorghum | peroxisome | 42.15 | 25.37 |
| Zm00001d031544_P001 | Maize | plastid | 42.98 | 25.24 |
| CDY07237 | Canola | nucleus | 38.84 | 24.35 |
| CDY60434 | Canola | nucleus | 36.36 | 24.04 |
| CDX98901 | Canola | nucleus | 36.36 | 24.04 |
| CDY15375 | Canola | nucleus | 33.88 | 22.78 |
| CDY10793 | Canola | nucleus | 33.88 | 22.78 |
| CDY24760 | Canola | nucleus | 33.06 | 22.22 |
| CDY14832 | Canola | mitochondrion, nucleus | 36.36 | 22.11 |
| CDY07236 | Canola | plastid | 39.67 | 21.43 |
| CDY67746 | Canola | nucleus | 38.84 | 21.17 |
| CDY54923 | Canola | cytosol, nucleus, plastid | 38.84 | 20.98 |
| CDY69735 | Canola | cytosol, nucleus, plastid | 38.84 | 20.98 |
| CDX71962 | Canola | plastid | 36.36 | 19.91 |
| CDY22562 | Canola | nucleus | 38.84 | 19.75 |
| CDY06048 | Canola | plastid | 36.36 | 19.56 |
| CDY00547 | Canola | mitochondrion, nucleus | 34.71 | 19.35 |
| CDX88974 | Canola | mitochondrion, nucleus | 34.71 | 19.18 |
| CDY70198 | Canola | nucleus | 38.02 | 18.85 |
| CDY64515 | Canola | nucleus, plastid | 38.02 | 18.85 |
| CDY47969 | Canola | nucleus | 38.02 | 18.7 |
| CDY14831 | Canola | nucleus | 38.02 | 18.7 |
| CDY18932 | Canola | plastid | 38.02 | 18.33 |
| CDY19098 | Canola | cytosol | 35.54 | 17.99 |
| CDY47970 | Canola | nucleus | 38.02 | 17.42 |
| CDY68635 | Canola | nucleus | 37.19 | 17.37 |
| CDX92049 | Canola | plastid | 38.02 | 17.23 |
| CDY29956 | Canola | plastid | 38.84 | 17.09 |
| CDY57109 | Canola | plastid | 36.36 | 16.92 |
| CDX74209 | Canola | plastid | 38.02 | 16.85 |
Protein Annotations
| EnsemblPlants:CDY48982 | EnsemblPlantsGene:GSBRNA2T00092182001 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF13 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:CDY48982 | ProteinID:CDY48982.1 | SEG:seg |
| UniParc:UPI0004EE9409 | UniProt:A0A078IG67 | MapMan:15.5.24 | : | : | : |
Description
BnaA02g28140DBnaA02g28140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IG67]
Coordinates
chrLK032805:-:48812..49593
Molecular Weight (calculated)
13836.9 Da
IEP (calculated)
8.774
GRAVY (calculated)
-0.347
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPKRCAACR YLRRRCPKDC VFSPFFPPNN PEKFACVHRI YGAGNVSKML QQLPVQTRAE AVESLCFEAT CRIEDPVYGC VGMISLLQTQ IQKTERLLAR
101: TQAEITVSQI KHSQNQHSEF M
101: TQAEITVSQI KHSQNQHSEF M
001: MNPKRCAACK YLRRRCPKDC VFSPYFPPND PQKFACVHRI YGAGNVSKML QQLPDQTRAE AVESLCFEAK CRVDDPVYGC VGIIHLLKTQ IQKTQNELAK
101: TQAEIAVAQT KLSQTQNSDF M
101: TQAEIAVAQT KLSQTQNSDF M
Arabidopsis Description
LBD24LOB domain-containing protein 24 [Source:UniProtKB/Swiss-Prot;Acc:P59468]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.