Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73061 | Soybean | mitochondrion, nucleus | 54.34 | 54.09 |
| KRH15078 | Soybean | plastid | 52.97 | 50.22 |
| AT5G06080.1 | Thale cress | mitochondrion, nucleus | 40.18 | 49.72 |
| CDX98901 | Canola | nucleus | 39.27 | 46.99 |
| Bra009161.1-P | Field mustard | nucleus | 38.81 | 46.45 |
| CDY60434 | Canola | nucleus | 38.36 | 45.9 |
| VIT_07s0005g03030.t01 | Wine grape | plastid | 38.36 | 43.08 |
| VIT_15s0048g00840.t01 | Wine grape | cytosol, nucleus, plastid | 33.33 | 37.63 |
| VIT_07s0005g03020.t01 | Wine grape | mitochondrion, nucleus | 39.27 | 37.07 |
| PGSC0003DMT400097267 | Potato | cytosol, mitochondrion, plastid | 24.66 | 34.84 |
| VIT_13s0019g03810.t01 | Wine grape | plastid | 21.92 | 34.53 |
| VIT_08s0056g01650.t01 | Wine grape | cytosol, nucleus, plastid | 36.99 | 34.03 |
| VIT_13s0067g01450.t01 | Wine grape | plastid | 25.57 | 32.75 |
| VIT_15s0048g00830.t01 | Wine grape | nucleus | 36.53 | 31.87 |
| VIT_13s0019g03800.t01 | Wine grape | plastid | 20.09 | 29.93 |
| VIT_16s0100g00440.t01 | Wine grape | mitochondrion | 20.55 | 29.41 |
| VIT_13s0019g03830.t01 | Wine grape | plastid | 21.92 | 28.4 |
| VIT_13s0019g03820.t01 | Wine grape | nucleus, plastid | 22.83 | 26.04 |
| VIT_13s0019g03840.t01 | Wine grape | nucleus, plastid | 22.37 | 25.26 |
Protein Annotations
| ArrayExpress:VIT_13s0019g02060 | EMBL:FN595998 | EnsemblPlants:VIT_13s0019g02060.t01 | EnsemblPlantsGene:VIT_13s0019g02060 | EntrezGene:100241046 | EntrezGene:LOC100241046 |
| InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31529 | PANTHER:PTHR31529:SF6 | PFAM:PF03195 |
| PFscan:PS50891 | ProteinID:CBI31640 | ProteinID:CBI31640.3 | RefSeq:XP_002277994 | RefSeq:XP_002277994.1 | UniParc:UPI00015C9763 |
| UniProt:D7TLQ3 | wikigene:100241046 | wikigene:LOC100241046 | MapMan:15.5.24 | : | : |
Description
No Description!
Coordinates
chr13:+:3355970..3356735
Molecular Weight (calculated)
24296.4 Da
IEP (calculated)
4.961
GRAVY (calculated)
-0.272
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGIGASCGA CKFLRRRCTS DCVFAPHFCY DQAASHFAAV HKVFGASNVS KLLLHLPLHN RGEAAITISY EALARMRDPV YGCVAHIFAL QQQVANLQEE
101: IEILGNHMAT FAPDTVTGEH YGATNNLNTG LQFSSQTDTL NMQDYLNQQA LLLSHAGNAT ANQAFDSLMN EQPPPLYGWE NQNFFCDSDA TPLERLFEGI
201: DQEFSAYYPW SDNTTYPKN
101: IEILGNHMAT FAPDTVTGEH YGATNNLNTG LQFSSQTDTL NMQDYLNQQA LLLSHAGNAT ANQAFDSLMN EQPPPLYGWE NQNFFCDSDA TPLERLFEGI
201: DQEFSAYYPW SDNTTYPKN
001: MASHGSSCGA CKFLRRKCNR DCVFSPYFSY EQASSHFAAV HKVFGASNVS KHLLHLPQHQ RNIAAITISY EALSRMRDPV YGCVAHIFAL HQQVVTLQEE
101: IEFLGSQMKN FSYSNQNGSQ LNNIPEFVNQ MTMATTNFVD ESVLNNADGR NCYDGFFTNS EEMLVNHQWL QNMDYYY
101: IEFLGSQMKN FSYSNQNGSQ LNNIPEFVNQ MTMATTNFVD ESVLNNADGR NCYDGFFTNS EEMLVNHQWL QNMDYYY
Arabidopsis Description
LBD33LOB domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHS8]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.