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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • mitochondrion 2
  • plastid 4
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G016200.1 Wheat plastid 97.11 96.0
HORVU4Hr1G002480.2 Barley cytosol 90.75 88.2
Zm00001d013625_P001 Maize cytosol, mitochondrion, nucleus, plastid 71.1 61.81
EER93717 Sorghum plastid 69.94 58.45
KRH50484 Soybean cytosol, nucleus, plastid 52.6 57.23
PGSC0003DMT400054637 Potato cytosol, nucleus, plastid 53.18 57.14
Solyc02g069440.2.1 Tomato nucleus 52.6 56.52
KRG89441 Soybean cytosol, nucleus, plastid 53.18 56.1
Zm00001d033466_P001 Maize plastid 68.21 55.92
Solyc11g045530.1.1 Tomato cytosol, mitochondrion, nucleus, plastid 54.91 55.56
PGSC0003DMT400022286 Potato cytosol, mitochondrion, nucleus, plastid 54.91 55.56
VIT_19s0027g01120.t01 Wine grape cytosol, mitochondrion, nucleus, plastid 54.34 55.29
KRH11753 Soybean cytosol, mitochondrion, nucleus, plastid 53.76 54.71
VIT_00s0125g00290.t01 Wine grape cytosol, mitochondrion, nucleus, plastid 54.91 54.29
KRH43747 Soybean mitochondrion 55.49 54.24
KRH36753 Soybean cytosol, mitochondrion, nucleus, plastid 53.18 54.12
GSMUA_Achr5P02190_001 Banana mitochondrion 51.45 53.61
TraesCS4D01G014600.1 Wheat nucleus 90.75 53.4
GSMUA_Achr2P13170_001 Banana nucleus 53.18 52.87
KRH13706 Soybean mitochondrion 54.34 52.81
CDX77553 Canola cytosol, mitochondrion, nucleus, plastid 52.02 52.33
Bra014907.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 52.02 52.33
CDY50718 Canola cytosol, mitochondrion, nucleus, plastid 51.45 51.74
AT1G31320.1 Thale cress cytosol, mitochondrion, nucleus, plastid 51.45 51.74
GSMUA_Achr4P32000_001 Banana cytosol, mitochondrion, nucleus, plastid 53.18 50.55
CDY40054 Canola mitochondrion 47.4 50.31
GSMUA_Achr7P00880_001 Banana cytosol, nucleus, plastid 53.76 50.0
CDY66794 Canola mitochondrion 46.82 49.69
Bra026042.1-P Field mustard mitochondrion 46.82 49.69
Solyc12g100150.1.1 Tomato mitochondrion 47.98 49.4
CDX81767 Canola cytosol, nucleus, plastid 46.82 49.39
PGSC0003DMT400061283 Potato mitochondrion, nucleus 47.98 49.11
CDY50999 Canola cytosol, mitochondrion, plastid 46.24 48.78
Bra026716.1-P Field mustard mitochondrion 45.66 48.17
AT1G16530.1 Thale cress mitochondrion 45.66 47.88
TraesCS5A01G152200.1 Wheat plastid 46.24 45.2
TraesCS1A01G222300.1 Wheat mitochondrion 45.66 41.8
TraesCS1A01G062200.1 Wheat cytosol, plastid 42.77 35.92
TraesCS1A01G111700.1 Wheat nucleus 41.62 30.38
TraesCS3A01G093200.1 Wheat plastid 43.35 29.18
TraesCS3A01G346300.1 Wheat cytosol 40.46 28.0
TraesCS4A01G107300.1 Wheat plastid 35.84 27.8
TraesCS3A01G402300.1 Wheat plastid 36.99 24.71
TraesCS1A01G260000.1 Wheat plastid 36.99 24.24
TraesCS4A01G235100.1 Wheat nucleus 37.57 22.57
Protein Annotations
EnsemblPlants:TraesCS4A01G297500.1EnsemblPlantsGene:TraesCS4A01G297500InterPro:IPR004883InterPro:LOBncoils:CoilPANTHER:PTHR31301
PANTHER:PTHR31301:SF15PFAM:PF03195PFscan:PS50891SEG:segMapMan:15.5.24:
Description
No Description!
Coordinates
chr4A:-:596770660..596773730
Molecular Weight (calculated)
18460.0 Da
IEP (calculated)
8.137
GRAVY (calculated)
-0.166
Length
173 amino acids
Sequence
(BLAST)
001: MKEVAAAGAG VSPCAACKLL RRRCSPGCVF APYFPSGEPH RFASVHKVFG ASNISKLLQE IPAEHRGDTV SSLVYEANAR VRDPIYGCVG AITSLQRQVE
101: SLQTQLALAQ AEMVRLRMAN AYGAARHNGG GSTASGSPSS MSSPTKTADH HDMAVDQSGV MELELECSRF WAY
Best Arabidopsis Sequence Match ( AT1G31320.1 )
(BLAST)
001: MKESSRKQGA ASPCAACKLL RRRCAQDCVF SPYFPADEPQ KFANVHRVFG ASNVNKMLQE LPIHQRGDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID
101: VLQAQLALAQ AEVVHLRVRQ STNFPGHGLC PDSPSSSGSP SSKQVSPQDN KGMFSHMDIV DEASLGESMW SC
Arabidopsis Description
LBD4LOB domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHE9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.