Factsheet for Bra026042.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66794	Canola	mitochondrion	100.0	100.0
CDY40054	Canola	mitochondrion	98.77	98.77
Bra026716.1-P	Field mustard	mitochondrion	85.28	84.76
AT1G16530.1	Thale cress	mitochondrion	81.6	80.61
Solyc11g045530.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	58.9	56.14
VIT_19s0027g01120.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	58.28	55.88
PGSC0003DMT400022286	Potato	cytosol, mitochondrion, nucleus, plastid	58.28	55.56
KRH43747	Soybean	mitochondrion	58.9	54.24
Bra014907.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	56.44	53.49
Bra025294.1-P	Field mustard	plastid	42.33	52.27
KRH13706	Soybean	mitochondrion	57.06	52.25
Bra039072.1-P	Field mustard	plastid	41.72	51.91
Bra033019.1-P	Field mustard	plastid	41.72	51.52
Solyc12g100150.1.1	Tomato	mitochondrion	51.53	50.0
PGSC0003DMT400061283	Potato	mitochondrion, nucleus	51.53	49.7
GSMUA_Achr5P02190_001	Banana	mitochondrion	49.08	48.19
TraesCS4B01G016200.1	Wheat	plastid	50.92	47.43
HORVU4Hr1G002480.2	Barley	cytosol	51.53	47.19
GSMUA_Achr2P13170_001	Banana	nucleus	50.31	47.13
TraesCS4A01G297500.1	Wheat	plastid	49.69	46.82
GSMUA_Achr7P00880_001	Banana	cytosol, nucleus, plastid	52.76	46.24
GSMUA_Achr4P32000_001	Banana	cytosol, mitochondrion, nucleus, plastid	51.53	46.15
Bra018335.1-P	Field mustard	mitochondrion	49.69	42.86
Zm00001d013625_P001	Maize	cytosol, mitochondrion, nucleus, plastid	52.15	42.71
Bra021612.1-P	Field mustard	nucleus	49.69	42.63
Bra022780.1-P	Field mustard	mitochondrion, nucleus	49.08	42.55
EER93717	Sorghum	plastid	53.37	42.03
Bra038606.1-P	Field mustard	plastid	46.63	41.99
Bra035860.1-P	Field mustard	plastid	44.79	41.48
Zm00001d033466_P001	Maize	plastid	49.69	38.39
Bra039733.1-P	Field mustard	nucleus, plastid	43.56	35.15
Bra018675.1-P	Field mustard	plastid	43.56	34.47
Bra000188.1-P	Field mustard	plastid	41.1	33.67
Bra031599.1-P	Field mustard	nucleus, plastid	41.72	32.85
Bra016992.1-P	Field mustard	plastid	40.49	32.84
Bra004572.1-P	Field mustard	cytosol, mitochondrion, nucleus	44.17	32.29
Bra000491.1-P	Field mustard	plastid	42.94	30.3
Bra035698.1-P	Field mustard	plastid	42.33	30.13
Bra011942.1-P	Field mustard	plastid	42.94	30.04
Bra018320.1-P	Field mustard	mitochondrion	40.49	27.97
TraesCS4D01G014600.1	Wheat	nucleus	50.31	27.89
Bra032153.1-P	Field mustard	mitochondrion, nucleus	43.56	23.05
Bra012112.1-P	Field mustard	nucleus, plastid	42.33	20.41
Bra037142.1-P	Field mustard	nucleus, plastid	39.88	16.5

Protein Annotations

EnsemblPlants:Bra026042.1	EnsemblPlants:Bra026042.1-P	EnsemblPlantsGene:Bra026042	InterPro:IPR004883	InterPro:LOB	ncoils:Coil
PANTHER:PTHR31301	PANTHER:PTHR31301:SF7	PFAM:PF03195	PFscan:PS50891	SEG:seg	UniParc:UPI000253F20C
UniProt:M4EB83	MapMan:15.5.24	:	:	:	:

Description

AT1G16530 (E=3e-067) LBD3, ASL9 | ASL9 (ASYMMETRIC LEAVES 2 LIKE 9)

Coordinates

chrA06:-:6372131..6373653

Molecular Weight (calculated)

18076.7 Da

IEP (calculated)

8.372

GRAVY (calculated)

-0.187

Length

163 amino acids

Sequence
(BLAST)

001: MRRKGHSHGA VSPCAACKLL RRKCVEDCVF APYFPAKEPY KFAIVHKIFG ASNVNKMLQV LSENHRSDAV NSIVYEANAR VQDPVYGCVG IISSLQRQLE
101: TLQTQLAFAQ AELVHMKTLH RIDTKPPPYM ASGISFPANK DLSNDVDMAF AYENGAGESL WSC

Best Arabidopsis Sequence Match ( AT1G16530.1 )
(BLAST)

001: MRQKGHRHGR TVSPCAGCKL LRRKCVKDSC VFAPYFPAKE PYKFAIVHKI FGASNVNKML QELSENHRSD AVDSMVYEAN ARIQDPVYGC VGTISSLHRQ
101: LETLQTQLAF AQAELIHIRT LHRIHTKPPP YTASTVTFPS NKDFYSDIDM AVAYTDDAGD FLWSC

Arabidopsis Description

LBD3LOB domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA51]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.