Factsheet for Bra005177.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012112.1-P
Bra023252.1-P
Bra033103.1-P
Bra035511.1-P
Bra036212.1-P
Bra037142.1-P
Bra039733.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37630.1	Bra023252.1-P	AT1G32230.1	19548978
AT2G37630.1	Bra035511.1-P	AT1G32230.1	19548978
AT2G37630.1	Bra039733.1-P	AT1G65620.1	19228338
AT2G37630.1	Bra033103.1-P	AT3G29390.1	16243907
AT2G37630.1	Bra036212.1-P	AT3G29390.1	16243907
AT2G37630.1	Bra012112.1-P	AT5G66870.1	16243907
AT2G37630.1	Bra037142.1-P	AT5G66870.1	16243907

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74943	Canola	nucleus	98.89	97.54
Bra000011.1-P	Field mustard	nucleus	88.09	91.64
AT2G37630.1	Thale cress	nucleus	89.47	88.01
VIT_08s0007g00410.t01	Wine grape	nucleus	70.08	70.67
Solyc09g010840.1.1	Tomato	nucleus	67.87	68.06
KRG99949	Soybean	nucleus	66.76	67.51
PGSC0003DMT400022771	Potato	nucleus	67.31	67.31
GSMUA_Achr7P10550_001	Banana	nucleus	56.23	66.34
KRH49100	Soybean	nucleus	66.2	66.2
HORVU7Hr1G077530.1	Barley	mitochondrion, nucleus	30.19	65.66
KRH66092	Soybean	nucleus	63.16	63.87
GSMUA_Achr9P28330_001	Banana	nucleus	56.51	63.35
KRG99521	Soybean	nucleus	61.77	63.35
TraesCS5A01G079100.1	Wheat	nucleus	56.23	59.18
GSMUA_Achr9P03320_001	Banana	nucleus	44.04	57.61
Os12t0572000-01	Rice	nucleus	53.74	56.73
HORVU5Hr1G021230.1	Barley	mitochondrion, nucleus	56.79	56.63
TraesCS5D01G093100.1	Wheat	mitochondrion, nucleus	56.51	56.51
TraesCS5B01G086900.1	Wheat	mitochondrion, nucleus	56.79	56.47
Zm00001d030737_P001	Maize	nucleus	53.74	52.43
EES17234	Sorghum	nucleus	54.02	51.18
HORVU5Hr1G112000.2	Barley	extracellular, nucleus	32.69	40.0
GSMUA_Achr5P29070_001	Banana	nucleus	59.0	36.22
HORVU6Hr1G071420.2	Barley	plastid	15.79	30.98
Bra030743.1-P	Field mustard	nucleus	15.24	20.75
Bra025361.1-P	Field mustard	nucleus	17.45	18.92
Bra033067.1-P	Field mustard	nucleus	16.9	18.71
Bra039040.1-P	Field mustard	nucleus	17.17	18.34
Bra018598.1-P	Field mustard	nucleus	14.13	18.09
Bra015899.1-P	Field mustard	nucleus	16.62	18.02
Bra003793.1-P	Field mustard	nucleus	16.62	17.75
Bra035893.1-P	Field mustard	nucleus	16.07	17.31
Bra029258.1-P	Field mustard	nucleus	16.34	17.2
Bra008160.1-P	Field mustard	nucleus	16.07	17.11
Bra010085.1-P	Field mustard	nucleus	16.07	12.95

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra005177	EnsemblPlants:Bra005177.1	EnsemblPlants:Bra005177.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009987	GO:GO:0010338	InterPro:Homeobox-like_sf
InterPro:IPR017930	UniProt:M4CLU0	InterPro:Myb_dom	PFAM:PF13921	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF457	InterPro:RS2/AS1	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00025478C8
SEG:seg	:	:	:	:	:

Description

AT2G37630 (E=1e-161) ATPHAN, AS1, ATMYB91, MYB91 | AS1 (ASYMMETRIC LEAVES 1); DNA binding / protein homodimerization/ transcription factor

Coordinates

chrA05:+:3850124..3851209

Molecular Weight (calculated)

41842.9 Da

IEP (calculated)

9.904

GRAVY (calculated)

-1.009

Length

361 amino acids

Sequence
(BLAST)

001: MKERQRWSGE EDALLRAYVR QFGPREWHLV SERMNKPLNR DAKSCLERWK NYLKPGIKKG SLTEEEQRLV IRLQEKHGNK WKKIAAEVPG RTAKRLGKWW
101: EVFKEKQQRE EKESNKRVEP IDESKYDRIL ESFAEKLVKE RSSVPSAVMA SSNGGFQQAP PPNNNNNHVI PPWLATSNNG NNVVARPPSV TLTLSPSVAA
201: TPPPQQQPIP WLQQQQPEAS PGGLVLGSMI PSCSGSNESV FMSELVECCR EVEEGHRAWA EHKKEAAWRL RRLELQLESE KTSRQREKTE EIETKMKALR
301: EEQKMAMEKI EGEYREQLVG LRRDAEAKDQ KLADQWTSKH IRLTKFLEQH MGCRQRLLDR P

Best Arabidopsis Sequence Match ( AT2G37630.1 )
(BLAST)

001: MKERQRWSGE EDALLRAYVR QFGPREWHLV SERMNKPLNR DAKSCLERWK NYLKPGIKKG SLTEEEQRLV IRLQEKHGNK WKKIAAEVPG RTAKRLGKWW
101: EVFKEKQQRE EKESNKRVEP IDESKYDRIL ESFAEKLVKE RSNVVPAAAA AATVVMANSN GGFLHSEQQV QPPNPVIPPW LATSNNGNNV VARPPSVTLT
201: LSPSTVAAAA PQPPIPWLQQ QQPERAENGP GGLVLGSMMP SCSGSSESVF LSELVECCRE LEEGHRAWAD HKKEAAWRLR RLELQLESEK TCRQREKMEE
301: IEAKMKALRE EQKNAMEKIE GEYREQLVGL RRDAEAKDQK LADQWTSRHI RLTKFLEQQM GCRLDRP

Arabidopsis Description

AS1Transcription factor AS1 [Source:UniProtKB/Swiss-Prot;Acc:O80931]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.