Factsheet for Bra010085.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00289	Canola	nucleus	59.6	96.39
CDY69264	Canola	nucleus	70.54	95.18
Bra029258.1-P	Field mustard	nucleus	68.75	89.8
Bra035893.1-P	Field mustard	nucleus	65.4	87.46
AT5G62470.2	Thale cress	nucleus	67.41	85.8
KRG94429	Soybean	nucleus	12.72	66.28
Bra033067.1-P	Field mustard	nucleus	39.51	54.29
Bra025361.1-P	Field mustard	nucleus	39.51	53.15
KRH40103	Soybean	nucleus	38.84	52.41
KRH01168	Soybean	nucleus	39.06	52.4
Bra039040.1-P	Field mustard	nucleus	39.51	52.37
Bra015899.1-P	Field mustard	nucleus	38.62	51.95
KRG93528	Soybean	nucleus	38.17	50.74
Bra003793.1-P	Field mustard	nucleus	38.17	50.59
Bra030743.1-P	Field mustard	nucleus	29.69	50.19
KRH18478	Soybean	nucleus	37.28	50.15
Bra008160.1-P	Field mustard	nucleus	37.72	49.85
KRH66212	Soybean	cytosol	16.52	49.01
Bra018598.1-P	Field mustard	nucleus	30.13	47.87
Bra000011.1-P	Field mustard	nucleus	13.17	17.0
Bra005177.1-P	Field mustard	nucleus	12.95	16.07

Protein Annotations

EnsemblPlants:Bra010085.1	EnsemblPlants:Bra010085.1-P	EnsemblPlantsGene:Bra010085	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF902	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000253F6DE	UniProt:M4D0T6	MapMan:15.5.2.1	:	:

Description

AT5G62470 (E=7e-138) MYB96 | MYB96 (myb domain protein 96); DNA binding / transcription factor

Coordinates

chrA06:-:19277939..19285531

Molecular Weight (calculated)

50092.0 Da

IEP (calculated)

7.211

GRAVY (calculated)

-0.610

Length

448 amino acids

Sequence
(BLAST)

001: MVRPPCCERN GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMIVH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKIN ESGREDNDDF SSSNTISQKQ QQTSNKGQWE RRLQTDINMA KQALCEALSL DKEPSSTLSP SSLSTPVIIP QNIRSFSSAL
201: LDRCYDPSSS SSSTTTTTTT TSNNTNPYPS GVYASSAENI ARLLQDFMKD TPKTLTLTSS SPVSETGPLA SATSEEGGEG FEQSFFSFNS MEETQNLTQE
301: TSFFHDQESK RAVTMEQDSG LISQGSLSLL EKWLFDENMV VILLQVGYLK AETMLQTADE QVMTLKKHNK LKFGTMNMWF LLNSPGKATI HVENVNSLMQ
401: HMRLNSTLAM RSVLGGNHNP ADDTPGATCV FCKSSEGMKL TGSYWPCS

Best Arabidopsis Sequence Match ( AT5G62470.2 )
(BLAST)

001: MGRPPCCEKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKTIVH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKIN ESGEEDNDGV SSSNTSSQKN HQSTNKGQWE RRLQTDINMA KQALCEALSL DKPSSTLSSS SSLPTPVITQ QNIRNFSSAL
201: LDRCYDPSSS SSSTTTTTTS NTTNPYPSGV YASSAENIAR LLQDFMKDTP KALTLSSSSP VSETGPLTAA VSEEGGEGFE QSFFSFNSMD ETQNLTQETS
301: FFHDQVIKPE ITMDQDHGLI SQGSLSLFEK WLFDEQSHEM VGMALAGQEG MF

Arabidopsis Description

MYB96Transcription factor MYB96 [Source:UniProtKB/Swiss-Prot;Acc:Q24JK1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.