Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030743.1-P | Field mustard | nucleus | 55.67 | 59.25 |
| AT1G08810.1 | Thale cress | nucleus | 56.03 | 56.43 |
| Solyc10g081490.1.1 | Tomato | nucleus | 51.77 | 54.07 |
| PGSC0003DMT400072272 | Potato | nucleus | 51.77 | 53.68 |
| GSMUA_Achr9P17050_001 | Banana | nucleus | 50.0 | 50.54 |
| GSMUA_Achr10P... | Banana | nucleus | 50.0 | 48.96 |
| GSMUA_Achr3P09450_001 | Banana | nucleus | 49.65 | 48.44 |
| GSMUA_Achr10P... | Banana | nucleus | 48.23 | 47.55 |
| GSMUA_Achr5P07720_001 | Banana | nucleus | 48.94 | 46.78 |
| VIT_08s0056g00800.t01 | Wine grape | nucleus | 52.84 | 46.42 |
| KRG94936 | Soybean | nucleus | 55.67 | 45.11 |
| Zm00001d023282_P001 | Maize | nucleus | 46.1 | 44.98 |
| TraesCS4D01G123300.1 | Wheat | nucleus | 46.45 | 43.67 |
| Os12t0125000-01 | Rice | nucleus | 47.87 | 43.41 |
| KRH64960 | Soybean | nucleus | 55.32 | 43.33 |
| KXG22874 | Sorghum | nucleus | 48.94 | 43.26 |
| TraesCS4B01G129100.1 | Wheat | nucleus | 46.1 | 43.19 |
| Os11t0128500-01 | Rice | nucleus | 47.16 | 43.18 |
| HORVU4Hr1G023510.2 | Barley | nucleus | 46.1 | 43.05 |
| TraesCS4A01G189700.1 | Wheat | nucleus | 46.1 | 42.62 |
| TraesCS5A01G142500.1 | Wheat | nucleus | 47.87 | 41.8 |
| Bra033067.1-P | Field mustard | nucleus | 48.23 | 41.72 |
| TraesCS5D01G149600.1 | Wheat | nucleus | 48.23 | 41.59 |
| HORVU5Hr1G045540.1 | Barley | nucleus | 47.87 | 41.28 |
| Bra035893.1-P | Field mustard | nucleus | 48.58 | 40.9 |
| Bra025361.1-P | Field mustard | nucleus | 48.23 | 40.84 |
| Zm00001d052397_P001 | Maize | nucleus | 49.29 | 40.76 |
| TraesCS5B01G141200.1 | Wheat | nucleus | 47.16 | 40.67 |
| Bra029258.1-P | Field mustard | nucleus | 48.58 | 39.94 |
| Bra039040.1-P | Field mustard | nucleus | 47.87 | 39.94 |
| KXG22875 | Sorghum | nucleus | 43.62 | 38.56 |
| Bra015899.1-P | Field mustard | nucleus | 44.68 | 37.84 |
| HORVU5Hr1G045550.1 | Barley | nucleus | 47.87 | 37.29 |
| Bra008160.1-P | Field mustard | nucleus | 44.68 | 37.17 |
| Zm00001d023284_P001 | Maize | nucleus | 37.23 | 36.84 |
| OQU82780 | Sorghum | nucleus | 50.0 | 36.81 |
| Bra003793.1-P | Field mustard | nucleus | 43.97 | 36.69 |
| Zm00001d023287_P001 | Maize | nucleus | 37.94 | 35.79 |
| Bra010085.1-P | Field mustard | nucleus | 47.87 | 30.13 |
| Bra000011.1-P | Field mustard | nucleus | 17.73 | 14.41 |
| Bra005177.1-P | Field mustard | nucleus | 18.09 | 14.13 |
Protein Annotations
| EnsemblPlants:Bra018598.1 | EnsemblPlants:Bra018598.1-P | EnsemblPlantsGene:Bra018598 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF726 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000253E812 | UniProt:M4DQ07 | MapMan:15.5.2.1 | : | : |
Description
AT1G08810 (E=8e-117) MYB60, AtMYB60 | MYB60 (myb domain protein 60); DNA binding / transcription factor
Coordinates
chrA06:-:3047216..3048269
Molecular Weight (calculated)
32217.4 Da
IEP (calculated)
5.385
GRAVY (calculated)
-0.949
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCEKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLPRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQTLLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSE SEERSFSENM ALQTSATRNT TNHKSTYASS TENISCLLEG WMRASPESNT VNFLEEKLQN QTTNLMNDHH NQFPCEHVQG
201: SWEEGHSQTF NGDDDQVINV HPKESEKNVK SDRDVQEDGD GVDDDHNNAS PPLTFIEKWL LEETSTGVQM EEMSLMEPSN ML
101: DNDIKNYWNT HLKKKLNKSE SEERSFSENM ALQTSATRNT TNHKSTYASS TENISCLLEG WMRASPESNT VNFLEEKLQN QTTNLMNDHH NQFPCEHVQG
201: SWEEGHSQTF NGDDDQVINV HPKESEKNVK SDRDVQEDGD GVDDDHNNAS PPLTFIEKWL LEETSTGVQM EEMSLMEPSN ML
001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.