Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93535 | Canola | nucleus | 26.99 | 93.98 |
| CDX95030 | Canola | nucleus | 34.26 | 86.84 |
| GSMUA_Achr8P16920_001 | Banana | nucleus | 29.07 | 74.34 |
| GSMUA_Achr9P17050_001 | Banana | nucleus | 56.75 | 58.78 |
| GSMUA_Achr2P22010_001 | Banana | nucleus | 51.21 | 58.5 |
| GSMUA_Achr6P10700_001 | Banana | nucleus | 49.13 | 55.47 |
| GSMUA_Achr8P01400_001 | Banana | nucleus | 50.17 | 55.13 |
| GSMUA_Achr7P21010_001 | Banana | nucleus | 50.87 | 54.65 |
| Bra030743.1-P | Field mustard | nucleus | 49.83 | 54.34 |
| CDY31125 | Canola | nucleus | 49.83 | 54.34 |
| GSMUA_Achr5P07720_001 | Banana | nucleus | 55.36 | 54.24 |
| GSMUA_Achr7P18080_001 | Banana | nucleus | 50.17 | 53.7 |
| Solyc10g081490.1.1 | Tomato | nucleus | 50.17 | 53.7 |
| PGSC0003DMT400072272 | Potato | nucleus | 50.52 | 53.68 |
| GSMUA_Achr10P... | Banana | nucleus | 53.29 | 53.47 |
| CDY32135 | Canola | nucleus | 49.13 | 53.18 |
| GSMUA_Achr10P... | Banana | nucleus | 51.56 | 52.1 |
| AT1G08810.1 | Thale cress | nucleus | 50.17 | 51.79 |
| GSMUA_Achr6P02690_001 | Banana | nucleus | 44.64 | 51.6 |
| Bra018598.1-P | Field mustard | nucleus | 48.44 | 49.65 |
| KRG94936 | Soybean | nucleus | 59.17 | 49.14 |
| GSMUA_Achr4P00480_001 | Banana | nucleus | 44.98 | 49.06 |
| GSMUA_Achr7P21670_001 | Banana | nucleus | 48.44 | 48.44 |
| VIT_08s0056g00800.t01 | Wine grape | nucleus | 53.63 | 48.29 |
| KRH64960 | Soybean | nucleus | 59.52 | 47.78 |
| GSMUA_Achr11P... | Banana | nucleus | 41.18 | 47.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.71 | 46.88 |
| GSMUA_Achr10P... | Banana | nucleus | 48.44 | 44.44 |
| GSMUA_Achr7P10550_001 | Banana | nucleus | 23.18 | 21.9 |
| GSMUA_Achr9P19380_001 | Banana | nucleus | 22.15 | 20.85 |
| GSMUA_Achr9P28330_001 | Banana | nucleus | 22.84 | 20.5 |
| CDX95031 | Canola | nucleus, plastid | 10.73 | 20.0 |
| GSMUA_Achr9P03320_001 | Banana | nucleus | 18.69 | 19.57 |
| GSMUA_Achr5P29070_001 | Banana | nucleus | 22.15 | 10.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P09450_001 | EnsemblPlants:GSMUA_Achr3T09450_001 | EnsemblPlantsGene:GSMUA_Achr3G09450_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF726 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000296C4B4 | UniProt:M0SD62 | MapMan:15.5.2.1 | : | : |
Description
Putative Myb-related protein 306 [Source:GMGC_GENE;Acc:GSMUA_Achr3G09450_001]
Coordinates
chr3:+:6828783..6829849
Molecular Weight (calculated)
32156.0 Da
IEP (calculated)
7.441
GRAVY (calculated)
-0.535
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCHKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLTRCS KSCRLRWTNY LRPGIKRGNF TPHEEGIIIH LQSLLGNRWA AIASYLPRRT
101: DNDIKNYWNT HLKKKIKKHE AAADGYEMTC GTSSICLDNM EARKQDIATL TFPGFYKAPS IYASSTENIS RLLEGWVCSS PRQGKLQGSA ITDSNNNNGS
201: SSSNSNAIIL QKVQAESDRG SFETMMHEDL ASLLSFENMS GIAGAEAKQG MEDDQPPLSF LEKWLFDEAS AQVDGLMYLP ADRCSNSLF
101: DNDIKNYWNT HLKKKIKKHE AAADGYEMTC GTSSICLDNM EARKQDIATL TFPGFYKAPS IYASSTENIS RLLEGWVCSS PRQGKLQGSA ITDSNNNNGS
201: SSSNSNAIIL QKVQAESDRG SFETMMHEDL ASLLSFENMS GIAGAEAKQG MEDDQPPLSF LEKWLFDEAS AQVDGLMYLP ADRCSNSLF
001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.