Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31125 | Canola | nucleus | 27.1 | 15.85 |
| CDY32135 | Canola | nucleus | 27.1 | 15.73 |
| CDY64733 | Canola | nucleus | 16.77 | 12.56 |
| GSMUA_Achr10P... | Banana | nucleus | 21.94 | 11.81 |
| GSMUA_Achr9P17050_001 | Banana | nucleus | 20.65 | 11.47 |
| CDY00289 | Canola | nucleus | 20.0 | 11.19 |
| GSMUA_Achr10P... | Banana | nucleus | 20.65 | 11.19 |
| GSMUA_Achr5P07720_001 | Banana | nucleus | 21.29 | 11.19 |
| GSMUA_Achr3P09450_001 | Banana | nucleus | 20.0 | 10.73 |
| TraesCS5A01G142500.1 | Wheat | nucleus | 21.94 | 10.53 |
| CDY16773 | Canola | nucleus | 20.0 | 10.51 |
| TraesCS5D01G149600.1 | Wheat | nucleus | 21.94 | 10.4 |
| KXG22874 | Sorghum | nucleus | 21.29 | 10.34 |
| HORVU5Hr1G045540.1 | Barley | nucleus | 21.29 | 10.09 |
| Zm00001d052397_P001 | Maize | nucleus | 21.94 | 9.97 |
| TraesCS5B01G141200.1 | Wheat | nucleus | 20.65 | 9.79 |
| CDY30719 | Canola | nucleus | 16.77 | 9.7 |
| Zm00001d023282_P001 | Maize | nucleus | 18.06 | 9.69 |
| CDY69264 | Canola | nucleus | 20.0 | 9.34 |
| CDX86405 | Canola | nucleus | 20.0 | 9.31 |
| HORVU4Hr1G023510.2 | Barley | nucleus | 18.06 | 9.27 |
| CDX87250 | Canola | nucleus | 20.0 | 9.25 |
| CDY00107 | Canola | nucleus | 20.0 | 9.17 |
| OQU82780 | Sorghum | nucleus | 22.58 | 9.14 |
| HORVU5Hr1G045550.1 | Barley | nucleus | 21.29 | 9.12 |
| Os11t0128500-01 | Rice | nucleus | 18.06 | 9.09 |
| KXG22875 | Sorghum | nucleus | 18.71 | 9.09 |
| CDX85227 | Canola | nucleus | 19.35 | 9.01 |
| CDX86406 | Canola | nucleus | 19.35 | 9.01 |
| Os12t0125000-01 | Rice | nucleus | 18.06 | 9.0 |
| CDY04044 | Canola | nucleus | 18.06 | 8.92 |
| CDY44428 | Canola | nucleus | 18.71 | 8.9 |
| TraesCS4D01G123300.1 | Wheat | nucleus | 16.77 | 8.67 |
| TraesCS4B01G129100.1 | Wheat | nucleus | 16.77 | 8.64 |
| TraesCS4A01G189700.1 | Wheat | nucleus | 16.77 | 8.52 |
| Zm00001d023284_P001 | Maize | nucleus | 14.19 | 7.72 |
| CDX73103 | Canola | nucleus | 16.13 | 7.55 |
| CDX85848 | Canola | nucleus | 14.84 | 7.1 |
| Zm00001d023287_P001 | Maize | nucleus | 13.55 | 7.02 |
| CDX96557 | Canola | nucleus | 14.84 | 6.91 |
| CDX68173 | Canola | nucleus | 13.55 | 6.5 |
| CDX74943 | Canola | nucleus | 5.81 | 2.46 |
| CDX91374 | Canola | nucleus | 5.16 | 2.24 |
| CDY07778 | Canola | nucleus | 4.52 | 2.02 |
| CDX79747 | Canola | nucleus | 4.52 | 2.01 |
| CDX93535 | Canola | nucleus | 0.0 | 0.0 |
| CDX95030 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX95031 | EnsemblPlantsGene:GSBRNA2T00100549001 | ProteinID:CDX95031 | ProteinID:CDX95031.1 | SEG:seg | UniParc:UPI0004EE1AE8 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC05g06400D
Coordinates
chrLK031886:+:784057..784643
Molecular Weight (calculated)
17447.9 Da
IEP (calculated)
4.325
GRAVY (calculated)
-0.932
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MALQTSATRN TINHRSTTYA SSTENISRLL EGSMRASPKS STANFLEEKM QKGTTNLMDD HENQFPCEHV QGSWEEDQSK TINGDDDHGF LVHPKESEKN
101: VSCDHDVQED GDGVDDDHKN ATSPLTFIEK WLLEETSTGV QMEEMSHLME LSNML
101: VSCDHDVQED GDGVDDDHKN ATSPLTFIEK WLLEETSTGV QMEEMSHLME LSNML
001: MVVVRWASIA SYLPQRTDND IKNYWNTHLK KKLNKSDSDE RSRSENIALQ TSSTRNTINH RSTYASSTEN ISRLLEGWMR ASPKSSTSTT FLEHKMQNRT
101: NNFIDHHSDQ FPYEQLQGSW EEGHSKGING DDDQGIKNSE NNNGDDVHHE DGDHEDDDDH NATPPLTFIE KWLLEETSTT GGQMEEMSHL MELSNML
101: NNFIDHHSDQ FPYEQLQGSW EEGHSKGING DDDQGIKNSE NNNGDDVHHE DGDHEDDDDH NATPPLTFIE KWLLEETSTT GGQMEEMSHL MELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.