Factsheet for Zm00001d023282_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93535	Canola	nucleus	24.57	85.54
CDX95030	Canola	nucleus	32.53	82.46
KXG22874	Sorghum	nucleus	78.2	70.85
KRH37834	Soybean	nucleus	23.18	56.78
Solyc10g081490.1.1	Tomato	nucleus	46.71	50.0
PGSC0003DMT400072272	Potato	nucleus	46.71	49.63
CDY32135	Canola	nucleus	45.67	49.44
Bra030743.1-P	Field mustard	nucleus	45.33	49.43
CDY31125	Canola	nucleus	45.33	49.43
Zm00001d052397_P001	Maize	nucleus	58.13	49.27
AT1G08810.1	Thale cress	nucleus	46.37	47.86
GSMUA_Achr7P21670_001	Banana	nucleus	46.71	46.71
Bra018598.1-P	Field mustard	nucleus	44.98	46.1
Zm00001d020457_P001	Maize	nucleus	45.67	43.71
Zm00001d053124_P001	Maize	nucleus	43.6	43.6
Zm00001d032178_P001	Maize	nucleus	43.6	42.57
Zm00001d023284_P001	Maize	nucleus	41.87	42.46
Zm00001d032179_P001	Maize	nucleus	43.6	42.14
Zm00001d023287_P001	Maize	nucleus	43.25	41.81
VIT_08s0056g00800.t01	Wine grape	nucleus	46.02	41.43
Zm00001d005760_P001	Maize	nucleus	45.67	40.49
Zm00001d022227_P002	Maize	nucleus	45.67	40.0
Zm00001d047182_P001	Maize	nucleus	42.21	38.36
GSMUA_Achr10P...	Banana	nucleus	41.18	37.78
CDX95031	Canola	nucleus, plastid	9.69	18.06
Zm00001d030737_P001	Maize	nucleus	19.72	15.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	ProteinID:AQK38842.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7TLS0	EMBL:KJ728308	InterPro:Myb_dom
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF909	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002213CF8	EnsemblPlantsGene:Zm00001d023282	EnsemblPlants:Zm00001d023282_P001	EnsemblPlants:Zm00001d023282_T001	SEG:seg

Description

MYB-transcription factor 69Putative MYB DNA-binding domain superfamily protein

Coordinates

chr10:+:2048298..2049531

Molecular Weight (calculated)

31779.5 Da

IEP (calculated)

8.074

GRAVY (calculated)

-0.555

Length

289 amino acids

Sequence
(BLAST)

001: MGRPPCCDKA GVKKGPWTPE EDIVLVSYVQ EHGPGNWRAV PVSTGLMRCS KSCRLRWTNY LRPGIRRGNF TPHEEGIIVH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLRKQQ AIGAIFAPPR PSEPTAGHAD CRRHDMTRSS KDSHAACPAD STPAADEVVT QLIAQQFAAT DGDTSSSSSY SYASSTDNIS
201: KLLNGFMMKS ASPARDDATD TIKTSSAIDI DPFDHKSGGA ALPPPKKRQQ QQHLSSIENW LFDDATEQLV VQLMEEISGG SCSVPMLLY

Best Arabidopsis Sequence Match ( AT1G08810.1 )
(BLAST)

001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML

Arabidopsis Description

MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.