CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94429	Soybean	nucleus	63.56	87.21
KRH66212	Soybean	cytosol	50.0	39.07
KRH40103	Soybean	nucleus	69.49	24.7
KRH01168	Soybean	nucleus	69.49	24.55
KRH56914	Soybean	nucleus	63.56	23.51
Zm00001d023282_P001	Maize	nucleus	56.78	23.18
KRG93528	Soybean	nucleus	66.1	23.15
KRH18478	Soybean	nucleus	65.25	23.12
KRH63348	Soybean	nucleus	61.86	22.88
GSMUA_Achr7P21670_001	Banana	nucleus	55.93	22.84
KRH03474	Soybean	nucleus	62.71	22.77
TraesCS4D01G123300.1	Wheat	nucleus	57.63	22.67
TraesCS4B01G129100.1	Wheat	nucleus	57.63	22.59
HORVU4Hr1G023510.2	Barley	nucleus	57.63	22.52
Os11t0128500-01	Rice	nucleus	57.63	22.08
TraesCS4A01G189700.1	Wheat	nucleus	56.78	21.97
KRH54550	Soybean	nucleus	61.86	21.92
Os12t0125000-01	Rice	nucleus	57.63	21.86
GSMUA_Achr10P...	Banana	nucleus	57.63	21.59
Zm00001d023284_P001	Maize	nucleus	50.85	21.05
TraesCS5A01G142500.1	Wheat	nucleus	57.63	21.05
KXG22874	Sorghum	nucleus	56.78	21.0
TraesCS5D01G149600.1	Wheat	nucleus	57.63	20.8
TraesCS5B01G141200.1	Wheat	nucleus	57.63	20.8
HORVU5Hr1G045540.1	Barley	nucleus	57.63	20.8
KRG94936	Soybean	nucleus	61.02	20.69
Zm00001d023287_P001	Maize	nucleus	51.69	20.4
KRH64960	Soybean	nucleus	61.02	20.0
Zm00001d052397_P001	Maize	nucleus	57.63	19.94
KXG22875	Sorghum	nucleus	52.54	19.44
HORVU5Hr1G045550.1	Barley	nucleus	57.63	18.78
OQU82780	Sorghum	nucleus	58.47	18.02
KRH66092	Soybean	nucleus	31.36	10.36
KRG99521	Soybean	nucleus	29.66	9.94
KRG99949	Soybean	nucleus	29.66	9.8
KRH49100	Soybean	nucleus	29.66	9.7

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	UniProt:A0A0R0I605	EMBL:ACUP02005520	EnsemblPlantsGene:GLYMA_09G092900	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:IPR017930
EnsemblPlants:KRH37834	ProteinID:KRH37834	ProteinID:KRH37834.1	InterPro:Myb-like_dom	InterPro:Myb_dom	PFAM:PF00249
PFscan:PS50090	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF715	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0006EDA314	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:12778037..12778719

Molecular Weight (calculated)

13600.8 Da

IEP (calculated)

10.601

GRAVY (calculated)

-0.332

Length

118 amino acids

Sequence
(BLAST)

001: MCIKQRLGLD TCIKTLSSKE GYRNKKESRQ HIILVSYIQE HGPGNWRAVP AKTGLSRCIK SCRLRSTNYL RPGIKQGNFT EQEEKMIIHL QDLLGNRWAA
101: IASYLPQRKL GFIILFLI

Best Arabidopsis Sequence Match ( AT1G74650.1 )
(BLAST)

001: MGRPPCCEKI EVKKGPWTPE EDIILVSYIQ QHGPGNWRSV PANTGLLRCS KSCRLRWTNY LRPGIKRGNF TQPEEKMIIH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLVMMK FQNGIINENK TNLATDISSC NNNNNGCNHN KRTTNKGQWE KKLQTDINMA KQALFQALSL DQPSSLIPPD PDSPKPHHHS
201: TTTYASSTDN ISKLLQNWTS SSSSKPNTSS VSNNRSSSPG EGGLFDHHSL FSSNSESGSV DEKLNLMSET SMFKGESKPD IDMEATPTTT TTDDQGSLSL
301: IEKWLFDDQG LVQCDDSQED LIDVSLEELK

Arabidopsis Description

ATY13At1g74650 [Source:UniProtKB/TrEMBL;Acc:Q9CA52]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.