Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93535 | Canola | nucleus | 21.7 | 89.16 |
| CDX95030 | Canola | nucleus | 28.15 | 84.21 |
| OQU82780 | Sorghum | nucleus | 81.82 | 72.85 |
| TraesCS5A01G142500.1 | Wheat | nucleus | 55.13 | 58.2 |
| Zm00001d023282_P001 | Maize | nucleus | 49.27 | 58.13 |
| KRH37834 | Soybean | nucleus | 19.94 | 57.63 |
| HORVU5Hr1G045540.1 | Barley | nucleus | 55.13 | 57.49 |
| TraesCS5D01G149600.1 | Wheat | nucleus | 55.13 | 57.49 |
| TraesCS5B01G141200.1 | Wheat | nucleus | 54.84 | 57.19 |
| Solyc10g081490.1.1 | Tomato | nucleus | 44.87 | 56.67 |
| PGSC0003DMT400072272 | Potato | nucleus | 44.57 | 55.88 |
| Os11t0128500-01 | Rice | nucleus | 48.97 | 54.22 |
| Os12t0125000-01 | Rice | nucleus | 49.27 | 54.02 |
| CDY31125 | Canola | nucleus | 41.35 | 53.21 |
| Bra030743.1-P | Field mustard | nucleus | 41.35 | 53.21 |
| CDY32135 | Canola | nucleus | 41.06 | 52.43 |
| HORVU5Hr1G045550.1 | Barley | nucleus | 55.13 | 51.93 |
| TraesCS4B01G129100.1 | Wheat | nucleus | 44.87 | 50.83 |
| TraesCS4D01G123300.1 | Wheat | nucleus | 44.57 | 50.67 |
| AT1G08810.1 | Thale cress | nucleus | 41.06 | 50.0 |
| TraesCS4A01G189700.1 | Wheat | nucleus | 44.57 | 49.84 |
| HORVU4Hr1G023510.2 | Barley | nucleus | 43.7 | 49.34 |
| Bra018598.1-P | Field mustard | nucleus | 40.76 | 49.29 |
| GSMUA_Achr7P21670_001 | Banana | nucleus | 41.06 | 48.44 |
| Zm00001d023284_P001 | Maize | nucleus | 37.83 | 45.26 |
| VIT_08s0056g00800.t01 | Wine grape | nucleus | 42.23 | 44.86 |
| Zm00001d053124_P001 | Maize | nucleus | 37.83 | 44.64 |
| Zm00001d032178_P001 | Maize | nucleus | 38.42 | 44.26 |
| Zm00001d020457_P001 | Maize | nucleus | 39.0 | 44.04 |
| Zm00001d023287_P001 | Maize | nucleus | 38.42 | 43.81 |
| GSMUA_Achr10P... | Banana | nucleus | 39.59 | 42.86 |
| Zm00001d032179_P001 | Maize | nucleus | 36.95 | 42.14 |
| Zm00001d022227_P002 | Maize | nucleus | 40.47 | 41.82 |
| Zm00001d005760_P001 | Maize | nucleus | 39.3 | 41.1 |
| Zm00001d047182_P001 | Maize | nucleus | 37.54 | 40.25 |
| CDX95031 | Canola | nucleus, plastid | 9.97 | 21.94 |
| Zm00001d030737_P001 | Maize | nucleus | 15.84 | 14.59 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:541761 | ProteinID:AQK57120.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7V1Y7 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF909 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000221452C | EnsemblPlantsGene:Zm00001d052397 | EnsemblPlants:Zm00001d052397_P001 | EnsemblPlants:Zm00001d052397_T001 | SEG:seg |
Description
glossy3 glossy3
Coordinates
chr4:-:189105110..189106135
Molecular Weight (calculated)
37008.5 Da
IEP (calculated)
6.990
GRAVY (calculated)
-0.499
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCDKE GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PINTGLMRCS KSCRLRWTNY LRPGIRRGNF TPHEEAIIVH LQSLLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLKKQQ AIGAIFAPPD SSSSSSSIVV PPAATTTTTT VDHHHRDMLG ANLLVSSKDT YYYARPPAEA AAVARRSPFA ADGDSSSSSY
201: ASSMDNISRL LTGFMKQQHD DAAAAADTKP PAPAAQVNSP PPAAFLSPSF HHHMSAGTGS GTPPAASAAY FNDMMPPPPP QQQAALMGGH GDYDDGPSSR
301: QHLQPSPLSP IEKWLFEEAA EQVGDLMDLS EDCCSSVPMM F
101: DNDIKNYWNT HLKKKLKKQQ AIGAIFAPPD SSSSSSSIVV PPAATTTTTT VDHHHRDMLG ANLLVSSKDT YYYARPPAEA AAVARRSPFA ADGDSSSSSY
201: ASSMDNISRL LTGFMKQQHD DAAAAADTKP PAPAAQVNSP PPAAFLSPSF HHHMSAGTGS GTPPAASAAY FNDMMPPPPP QQQAALMGGH GDYDDGPSSR
301: QHLQPSPLSP IEKWLFEEAA EQVGDLMDLS EDCCSSVPMM F
001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.