Factsheet for Zm00001d005760_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35628	Sorghum	nucleus	93.86	93.29
Zm00001d020457_P001	Maize	nucleus	84.97	91.72
GSMUA_Achr8P16920_001	Banana	nucleus	29.45	84.96
TraesCS5D01G234800.1	Wheat	nucleus	81.29	83.33
TraesCS5B01G226100.1	Wheat	nucleus	80.67	82.97
TraesCS5A01G227400.1	Wheat	nucleus	80.67	82.7
Zm00001d032179_P001	Maize	nucleus	54.6	59.53
GSMUA_Achr7P21010_001	Banana	nucleus	47.55	57.62
GSMUA_Achr4P00480_001	Banana	nucleus	46.63	57.36
GSMUA_Achr6P10700_001	Banana	nucleus	44.17	56.25
GSMUA_Achr8P01400_001	Banana	nucleus	44.48	55.13
Zm00001d032178_P001	Maize	nucleus	49.39	54.39
GSMUA_Achr2P22010_001	Banana	nucleus	42.02	54.15
GSMUA_Achr6P02690_001	Banana	nucleus	41.41	54.0
GSMUA_Achr7P18080_001	Banana	nucleus	43.87	52.96
Zm00001d022227_P002	Maize	nucleus	50.92	50.3
Zm00001d047182_P001	Maize	nucleus	45.4	46.54
Zm00001d053124_P001	Maize	nucleus	41.1	46.37
Zm00001d023282_P001	Maize	nucleus	40.49	45.67
Zm00001d052397_P001	Maize	nucleus	41.1	39.3
Zm00001d023284_P001	Maize	nucleus	32.82	37.54
Zm00001d023287_P001	Maize	nucleus	33.74	36.79
Zm00001d030737_P001	Maize	nucleus	21.47	18.92

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:541730	UniProt:A0A1D6EPY5	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	ProteinID:ONM21832.1
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF682	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002208739	EnsemblPlantsGene:Zm00001d005760	EnsemblPlants:Zm00001d005760_P001	EnsemblPlants:Zm00001d005760_T001	SEG:seg

Description

MYB-transcription factor 35R2R3MYB-domain protein

Coordinates

chr2:-:186872023..186873836

Molecular Weight (calculated)

34060.9 Da

IEP (calculated)

7.466

GRAVY (calculated)

-0.549

Length

326 amino acids

Sequence
(BLAST)

001: MGRPPCCDKV GVKKGPWTPE EDLMLVSYVQ EHGPGNWRAV PTNTGLMRCS KSCRLRWTNY LRPGIKRGNF TDQEEKLIIH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMQ AGEGGGGDGD GAAGASEGGA VATAGAGGKR PAVPKGQWER RLQTDIHTAR QALRDALSLE PSPSASAPPP AKVEPLPATA
201: PGYTTYASSA ENIARLLEGW LRPGSGGGKG PEASGSTSTT ATTQQRPQCS GEGAASASAS HSGGAPANAA AQTPECSTET SKVAGAGAAP PAFSMLESWL
301: LDDGMGHGED GLMTDVVPLG DPSEFF

Best Arabidopsis Sequence Match ( AT3G28910.1 )
(BLAST)

001: MVRPPCCDKG GVKKGPWTPE EDIILVTYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMIVH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLNKVN QDSHQELDRS SLSSSPSSSS ANSNSNISRG QWERRLQTDI HLAKKALSEA LSPAVAPIIT STVTTTSSSA ESRRSTSSAS
201: GFLRTQETST TYASSTENIA KLLKGWVKNS PKTQNSADQI ASTEVKEVIK SDDGKECAGA FQSFSEFDHS YQQAGVSPDH ETKPDITGCC SNQSQWSLFE
301: KWLFEDSGGQ IGDILLDENT NFF

Arabidopsis Description

MYB30Transcription factor MYB30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.