Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P16920_001 | Banana | nucleus | 32.83 | 76.99 |
| Os07t0629000-01 | Rice | nucleus | 42.64 | 74.34 |
| GSMUA_Achr7P21010_001 | Banana | nucleus | 66.79 | 65.8 |
| GSMUA_Achr2P22010_001 | Banana | nucleus | 56.23 | 58.89 |
| GSMUA_Achr6P10700_001 | Banana | nucleus | 56.6 | 58.59 |
| GSMUA_Achr6P02690_001 | Banana | nucleus | 52.83 | 56.0 |
| OQU93155 | Sorghum | nucleus | 27.92 | 55.64 |
| GSMUA_Achr7P18080_001 | Banana | nucleus | 55.85 | 54.81 |
| GSMUA_Achr8P01400_001 | Banana | nucleus | 54.34 | 54.75 |
| Os08t0437300-00 | Rice | nucleus | 52.83 | 53.44 |
| GSMUA_Achr11P... | Banana | nucleus | 47.92 | 50.6 |
| Zm00001d032179_P001 | Maize | nucleus | 56.98 | 50.5 |
| EES13898 | Sorghum | nucleus | 57.74 | 50.33 |
| GSMUA_Achr10P... | Banana | nucleus | 53.21 | 48.96 |
| Zm00001d020457_P001 | Maize | nucleus | 54.72 | 48.01 |
| TraesCS5D01G234800.1 | Wheat | nucleus | 57.36 | 47.8 |
| GSMUA_Achr10P... | Banana | nucleus | 51.32 | 47.55 |
| TraesCS5A01G227400.1 | Wheat | nucleus | 56.98 | 47.48 |
| TraesCS5B01G226100.1 | Wheat | nucleus | 56.6 | 47.32 |
| Zm00001d032178_P001 | Maize | nucleus | 52.83 | 47.3 |
| Zm00001d005760_P001 | Maize | nucleus | 57.36 | 46.63 |
| KXG35628 | Sorghum | nucleus | 56.98 | 46.04 |
| GSMUA_Achr7P21670_001 | Banana | nucleus | 50.19 | 46.02 |
| Os07t0484700-01 | Rice | nucleus | 28.68 | 45.51 |
| GSMUA_Achr5P07720_001 | Banana | nucleus | 50.57 | 45.42 |
| GSMUA_Achr3P09450_001 | Banana | nucleus | 49.06 | 44.98 |
| GSMUA_Achr9P17050_001 | Banana | nucleus | 47.17 | 44.8 |
| TraesCS2B01G183100.1 | Wheat | nucleus | 52.45 | 44.41 |
| TraesCS2D01G163700.1 | Wheat | nucleus | 52.08 | 44.09 |
| TraesCS2A01G157600.1 | Wheat | nucleus | 52.08 | 43.95 |
| EES13899 | Sorghum | nucleus | 50.57 | 43.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.55 | 43.75 |
| KXG39272 | Sorghum | nucleus | 50.57 | 42.01 |
| Zm00001d022227_P002 | Maize | nucleus | 51.7 | 41.52 |
| Zm00001d047182_P001 | Maize | nucleus | 49.81 | 41.51 |
| OQU90312 | Sorghum | nucleus | 51.32 | 41.46 |
| HORVU2Hr1G028470.1 | Barley | nucleus, plastid | 37.36 | 39.29 |
| GSMUA_Achr10P... | Banana | nucleus | 45.66 | 38.41 |
| GSMUA_Achr9P03320_001 | Banana | nucleus | 22.26 | 21.38 |
| GSMUA_Achr7P10550_001 | Banana | nucleus | 22.64 | 19.61 |
| CDY64733 | Canola | nucleus | 14.72 | 18.84 |
| GSMUA_Achr9P28330_001 | Banana | nucleus | 22.64 | 18.63 |
| GSMUA_Achr9P19380_001 | Banana | nucleus | 21.13 | 18.24 |
| GSMUA_Achr5P29070_001 | Banana | nucleus | 24.15 | 10.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P00480_001 | EnsemblPlants:GSMUA_Achr4T00480_001 | EnsemblPlantsGene:GSMUA_Achr4G00480_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF906 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0002949C9E | UniProt:M0SJW5 | MapMan:15.5.2.1 | : | : | : |
Description
Putative Myb-related protein 306 [Source:GMGC_GENE;Acc:GSMUA_Achr4G00480_001]
Coordinates
chr4:+:365369..366632
Molecular Weight (calculated)
29084.2 Da
IEP (calculated)
7.343
GRAVY (calculated)
-0.520
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRTPCCDKG VKKGPWTQEE DLVLASYVKE HGPGNWRAVP TNTGLMRCSK SCRLRWTNYL RPGIKRGNFT DQEERLIVHL QALLGNRWAA IASYLPERTD
101: NDIKNYWNTH LKKKLRRIQG SGDGATSNGG LSRCPPVSKD QWERRSSGFS LTAPITTTYA SSTENISRLL QGWMKQSPAA GADMVAGGDS TSTEGSATVA
201: SNNGVSPVGL PDSAFKIETP TPEVSEPNLF LGENRAAMEA PVFISLFETW LFDDSMPLDD TAELL
101: NDIKNYWNTH LKKKLRRIQG SGDGATSNGG LSRCPPVSKD QWERRSSGFS LTAPITTTYA SSTENISRLL QGWMKQSPAA GADMVAGGDS TSTEGSATVA
201: SNNGVSPVGL PDSAFKIETP TPEVSEPNLF LGENRAAMEA PVFISLFETW LFDDSMPLDD TAELL
001: MVRPPCCDKG GVKKGPWTPE EDIILVTYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMIVH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLNKVN QDSHQELDRS SLSSSPSSSS ANSNSNISRG QWERRLQTDI HLAKKALSEA LSPAVAPIIT STVTTTSSSA ESRRSTSSAS
201: GFLRTQETST TYASSTENIA KLLKGWVKNS PKTQNSADQI ASTEVKEVIK SDDGKECAGA FQSFSEFDHS YQQAGVSPDH ETKPDITGCC SNQSQWSLFE
301: KWLFEDSGGQ IGDILLDENT NFF
101: DNDIKNYWNT HLKKKLNKVN QDSHQELDRS SLSSSPSSSS ANSNSNISRG QWERRLQTDI HLAKKALSEA LSPAVAPIIT STVTTTSSSA ESRRSTSSAS
201: GFLRTQETST TYASSTENIA KLLKGWVKNS PKTQNSADQI ASTEVKEVIK SDDGKECAGA FQSFSEFDHS YQQAGVSPDH ETKPDITGCC SNQSQWSLFE
301: KWLFEDSGGQ IGDILLDENT NFF
Arabidopsis Description
MYB30Transcription factor MYB30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.