Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d022227_P002 | Maize | nucleus | 89.33 | 88.79 |
Os07t0629000-01 | Rice | nucleus | 39.94 | 86.18 |
GSMUA_Achr8P16920_001 | Banana | nucleus | 28.35 | 82.3 |
TraesCS2D01G163700.1 | Wheat | nucleus | 71.34 | 74.76 |
TraesCS2B01G183100.1 | Wheat | nucleus | 70.12 | 73.48 |
TraesCS2A01G157600.1 | Wheat | nucleus | 69.51 | 72.61 |
OQU93155 | Sorghum | nucleus | 23.78 | 58.65 |
GSMUA_Achr6P10700_001 | Banana | nucleus | 41.77 | 53.52 |
GSMUA_Achr2P22010_001 | Banana | nucleus | 40.55 | 52.57 |
GSMUA_Achr8P01400_001 | Banana | nucleus | 42.07 | 52.47 |
GSMUA_Achr7P21010_001 | Banana | nucleus | 42.99 | 52.42 |
GSMUA_Achr7P18080_001 | Banana | nucleus | 42.99 | 52.22 |
GSMUA_Achr4P00480_001 | Banana | nucleus | 41.46 | 51.32 |
GSMUA_Achr6P02690_001 | Banana | nucleus | 38.41 | 50.4 |
EES13898 | Sorghum | nucleus | 46.65 | 50.33 |
KXG35628 | Sorghum | nucleus | 50.0 | 50.0 |
KXG39272 | Sorghum | nucleus | 45.12 | 46.4 |
EES13899 | Sorghum | nucleus | 41.46 | 44.44 |
EES09957 | Sorghum | nucleus | 36.89 | 40.88 |
KXG22874 | Sorghum | nucleus | 39.63 | 40.75 |
KXG22875 | Sorghum | nucleus | 39.63 | 40.75 |
HORVU2Hr1G028470.1 | Barley | nucleus, plastid | 30.79 | 40.08 |
OQU82780 | Sorghum | nucleus | 41.46 | 35.51 |
CDY64733 | Canola | nucleus | 11.59 | 18.36 |
EES17234 | Sorghum | nucleus | 20.73 | 17.85 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:8063514 | UniProt:A0A1W0W7F6 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | EnsemblPlants:OQU90312 |
ProteinID:OQU90312 | ProteinID:OQU90312.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF715 |
InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3002G385450 | SUPFAM:SSF46689 | UniParc:UPI0001A83F9A | RefSeq:XP_002463232.1 |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:74016145..74017731
Molecular Weight (calculated)
34734.7 Da
IEP (calculated)
7.913
GRAVY (calculated)
-0.502
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRPPCCDKE GVKKGPWTPE EDLVLVSYIQ EHGPGNWRAV PAKTGLMRCS KSCRLRWTNY LRPGIKRGNF TEQEEKLIIH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKRKLQSGG GDGAAKPPAH RPPSSSKGQW ERRLQTDINL ARRALREALT PLDDLKPPQL QRDATAVDAP GAGLGVGGGD SPASSSSGAS
201: QCSPSSAPAA AATAAGPYVL TTENISRMLD GWAGRKAARG GSPGTPGGAE SASTGSSDAS EVSYGGGAAV TLAAAGGPVF EFETKPTVPP AQQMPLSAIE
301: SWLFDDDSHF HHVQSAGVLD AAPMDYPF
101: DNDIKNYWNT HLKRKLQSGG GDGAAKPPAH RPPSSSKGQW ERRLQTDINL ARRALREALT PLDDLKPPQL QRDATAVDAP GAGLGVGGGD SPASSSSGAS
201: QCSPSSAPAA AATAAGPYVL TTENISRMLD GWAGRKAARG GSPGTPGGAE SASTGSSDAS EVSYGGGAAV TLAAAGGPVF EFETKPTVPP AQQMPLSAIE
301: SWLFDDDSHF HHVQSAGVLD AAPMDYPF
001: MVRPPCCDKG GVKKGPWTPE EDIILVTYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMIVH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLNKVN QDSHQELDRS SLSSSPSSSS ANSNSNISRG QWERRLQTDI HLAKKALSEA LSPAVAPIIT STVTTTSSSA ESRRSTSSAS
201: GFLRTQETST TYASSTENIA KLLKGWVKNS PKTQNSADQI ASTEVKEVIK SDDGKECAGA FQSFSEFDHS YQQAGVSPDH ETKPDITGCC SNQSQWSLFE
301: KWLFEDSGGQ IGDILLDENT NFF
101: DNDIKNYWNT HLKKKLNKVN QDSHQELDRS SLSSSPSSSS ANSNSNISRG QWERRLQTDI HLAKKALSEA LSPAVAPIIT STVTTTSSSA ESRRSTSSAS
201: GFLRTQETST TYASSTENIA KLLKGWVKNS PKTQNSADQI ASTEVKEVIK SDDGKECAGA FQSFSEFDHS YQQAGVSPDH ETKPDITGCC SNQSQWSLFE
301: KWLFEDSGGQ IGDILLDENT NFF
Arabidopsis Description
MYB30Transcription factor MYB30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.