Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr8P16920_001 | Banana | nucleus | 36.33 | 82.3 |
Os07t0629000-01 | Rice | nucleus | 44.92 | 75.66 |
GSMUA_Achr2P22010_001 | Banana | nucleus | 62.89 | 63.64 |
GSMUA_Achr8P01400_001 | Banana | nucleus | 64.06 | 62.36 |
GSMUA_Achr4P00480_001 | Banana | nucleus | 58.59 | 56.6 |
GSMUA_Achr7P21010_001 | Banana | nucleus | 59.38 | 56.51 |
GSMUA_Achr7P18080_001 | Banana | nucleus | 57.81 | 54.81 |
GSMUA_Achr6P02690_001 | Banana | nucleus | 51.95 | 53.2 |
OQU93155 | Sorghum | nucleus | 26.95 | 51.88 |
EES13898 | Sorghum | nucleus | 58.98 | 49.67 |
GSMUA_Achr3P09450_001 | Banana | nucleus | 55.47 | 49.13 |
GSMUA_Achr9P17050_001 | Banana | nucleus | 53.52 | 49.1 |
GSMUA_Achr11P... | Banana | nucleus | 48.05 | 49.0 |
Os08t0437300-00 | Rice | nucleus | 50.0 | 48.85 |
Zm00001d032179_P001 | Maize | nucleus | 56.25 | 48.16 |
GSMUA_Achr5P07720_001 | Banana | nucleus | 55.08 | 47.8 |
GSMUA_Achr7P21670_001 | Banana | nucleus | 53.91 | 47.75 |
GSMUA_Achr10P... | Banana | nucleus | 53.12 | 47.22 |
Zm00001d032178_P001 | Maize | nucleus | 54.3 | 46.96 |
GSMUA_Achr10P... | Banana | nucleus | 51.56 | 46.15 |
GSMUA_AchrUn_... | Banana | nucleus | 51.56 | 45.83 |
Zm00001d020457_P001 | Maize | nucleus | 53.91 | 45.7 |
TraesCS5D01G234800.1 | Wheat | nucleus | 56.25 | 45.28 |
TraesCS5B01G226100.1 | Wheat | nucleus | 55.86 | 45.11 |
TraesCS5A01G227400.1 | Wheat | nucleus | 55.86 | 44.97 |
Os07t0484700-01 | Rice | nucleus | 29.3 | 44.91 |
EES13899 | Sorghum | nucleus | 53.52 | 44.77 |
KXG35628 | Sorghum | nucleus | 56.64 | 44.21 |
Zm00001d005760_P001 | Maize | nucleus | 56.25 | 44.17 |
GSMUA_Achr10P... | Banana | nucleus | 51.56 | 41.9 |
TraesCS2D01G163700.1 | Wheat | nucleus | 51.17 | 41.85 |
OQU90312 | Sorghum | nucleus | 53.52 | 41.77 |
TraesCS2B01G183100.1 | Wheat | nucleus | 50.78 | 41.53 |
TraesCS2A01G157600.1 | Wheat | nucleus | 50.78 | 41.4 |
Zm00001d022227_P002 | Maize | nucleus | 53.12 | 41.21 |
Zm00001d047182_P001 | Maize | nucleus | 51.17 | 41.2 |
KXG39272 | Sorghum | nucleus | 51.17 | 41.07 |
HORVU2Hr1G028470.1 | Barley | nucleus, plastid | 38.28 | 38.89 |
GSMUA_Achr9P03320_001 | Banana | nucleus | 21.09 | 19.57 |
GSMUA_Achr7P10550_001 | Banana | nucleus | 22.66 | 18.95 |
CDY64733 | Canola | nucleus | 14.84 | 18.36 |
GSMUA_Achr9P19380_001 | Banana | nucleus | 21.88 | 18.24 |
GSMUA_Achr9P28330_001 | Banana | nucleus | 22.27 | 17.7 |
GSMUA_Achr5P29070_001 | Banana | nucleus | 22.66 | 9.86 |
Protein Annotations
EnsemblPlants:GSMUA_Achr6P10700_001 | EnsemblPlants:GSMUA_Achr6T10700_001 | EnsemblPlantsGene:GSMUA_Achr6G10700_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
PANTHER:PTHR10641 | PANTHER:PTHR10641:SF906 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
SUPFAM:SSF46689 | UniParc:UPI0002956226 | UniProt:M0T5W9 | MapMan:15.5.2.1 | : | : |
Description
Myb-related protein 306 [Source:GMGC_GENE;Acc:GSMUA_Achr6G10700_001]
Coordinates
chr6:-:7121789..7122782
Molecular Weight (calculated)
28161.8 Da
IEP (calculated)
7.364
GRAVY (calculated)
-0.612
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCDKN GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PSNTGLMRCS KSCRLRWTNY LRPGIKRGNF TDQEEKLIIR LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKVRKPE TGSDCPKSSG QSSHRTASSV SCSFDSKPST YASNTENISR LLQGWTKGSP KPSVAPASSG SGVAESASSQ GSVSTSNCIM
201: SPEPLESVFG FNDSTAERSE AGAPFSLLES WLLDEHDGHW QESFLDVAVL DTCELF
101: DNDIKNYWNT HLKKKVRKPE TGSDCPKSSG QSSHRTASSV SCSFDSKPST YASNTENISR LLQGWTKGSP KPSVAPASSG SGVAESASSQ GSVSTSNCIM
201: SPEPLESVFG FNDSTAERSE AGAPFSLLES WLLDEHDGHW QESFLDVAVL DTCELF
001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.