Factsheet for Os07t0629000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P16920_001	Banana	nucleus	59.21	79.65
GSMUA_Achr6P10700_001	Banana	nucleus	75.66	44.92
Os07t0484700-01	Rice	nucleus	49.34	44.91
GSMUA_Achr8P01400_001	Banana	nucleus	77.63	44.87
GSMUA_Achr2P22010_001	Banana	nucleus	74.34	44.66
GSMUA_Achr6P02690_001	Banana	nucleus	71.71	43.6
TraesCS2D01G163700.1	Wheat	nucleus	88.16	42.81
GSMUA_Achr4P00480_001	Banana	nucleus	74.34	42.64
TraesCS2B01G183100.1	Wheat	nucleus	87.5	42.49
GSMUA_Achr7P21010_001	Banana	nucleus	75.0	42.38
TraesCS2A01G157600.1	Wheat	nucleus	86.84	42.04
Os08t0437300-00	Rice	nucleus	71.05	41.22
GSMUA_Achr7P18080_001	Banana	nucleus	73.03	41.11
Zm00001d022227_P002	Maize	nucleus	88.82	40.91
HORVU2Hr1G028470.1	Barley	nucleus, plastid	67.76	40.87
OQU90312	Sorghum	nucleus	86.18	39.94
Os11t0128500-01	Rice	nucleus	71.71	35.39
Os12t0125000-01	Rice	nucleus	71.71	35.05
Os11t0558200-01	Rice	nucleus	69.08	31.82
Os12t0572000-01	Rice	nucleus	34.87	15.5
CDY64733	Canola	nucleus	5.26	3.86

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	ProteinID:BAC79723.1	ProteinID:BAC79860.1	ProteinID:BAF22268.1	ProteinID:BAT02761.1
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os07g0629000
EnsemblPlants:Os07t0629000-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF906	UniProt:Q7X8X3
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00001B39EB	:	:

Description

R2R3-MYBSimilar to P-type R2R3 Myb protein (Fragment). (Os07t0629000-01)

Coordinates

chr7:-:26075493..26077145

Molecular Weight (calculated)

17312.5 Da

IEP (calculated)

7.384

GRAVY (calculated)

-0.586

Length

152 amino acids

Sequence
(BLAST)

001: MVRPPCCDKD GVKKGPWTPE EDLVLVSYVQ EHGPGNWRAV PTRTGLMRCS KSCRLRWTNY LRPGIKRGNF TDQEEKLIVH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKRKLQGGD ETQLSAIESW LFADADGIES GSLLDAAMDY TF

Best Arabidopsis Sequence Match ( AT3G28910.1 )
(BLAST)

001: MVRPPCCDKG GVKKGPWTPE EDIILVTYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMIVH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLNKVN QDSHQELDRS SLSSSPSSSS ANSNSNISRG QWERRLQTDI HLAKKALSEA LSPAVAPIIT STVTTTSSSA ESRRSTSSAS
201: GFLRTQETST TYASSTENIA KLLKGWVKNS PKTQNSADQI ASTEVKEVIK SDDGKECAGA FQSFSEFDHS YQQAGVSPDH ETKPDITGCC SNQSQWSLFE
301: KWLFEDSGGQ IGDILLDENT NFF

Arabidopsis Description

MYB30Transcription factor MYB30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.