Factsheet for TraesCS2A01G157600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G163700.1	Wheat	nucleus	97.77	98.08
TraesCS2B01G183100.1	Wheat	nucleus	96.18	96.49
Os07t0629000-01	Rice	nucleus	42.04	86.84
GSMUA_Achr8P16920_001	Banana	nucleus	29.94	83.19
OQU90312	Sorghum	nucleus	72.61	69.51
Zm00001d022227_P002	Maize	nucleus	72.61	69.09
GSMUA_Achr4P00480_001	Banana	nucleus	43.95	52.08
GSMUA_Achr7P21010_001	Banana	nucleus	44.27	51.67
GSMUA_Achr6P02690_001	Banana	nucleus	40.45	50.8
GSMUA_Achr6P10700_001	Banana	nucleus	41.4	50.78
GSMUA_Achr7P18080_001	Banana	nucleus	43.31	50.37
GSMUA_Achr8P01400_001	Banana	nucleus	41.72	49.81
TraesCS5A01G227400.1	Wheat	nucleus	50.32	49.69
GSMUA_Achr2P22010_001	Banana	nucleus	39.81	49.41
HORVU2Hr1G028470.1	Barley	nucleus, plastid	33.76	42.06
TraesCS4A01G322200.1	Wheat	nucleus	37.58	41.84
TraesCS4A01G189700.1	Wheat	nucleus	39.49	40.66
TraesCS5A01G142500.1	Wheat	nucleus	41.08	39.94
TraesCS5A01G079100.1	Wheat	nucleus	21.97	20.12
CDY64733	Canola	nucleus	11.78	17.87

Protein Annotations

EnsemblPlants:TraesCS2A01G157600.1	EnsemblPlantsGene:TraesCS2A01G157600	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	ncoils:Coil
PANTHER:PTHR10641	PANTHER:PTHR10641:SF715	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chr2A:+:104450076..104451783

Molecular Weight (calculated)

33427.0 Da

IEP (calculated)

8.929

GRAVY (calculated)

-0.554

Length

314 amino acids

Sequence
(BLAST)

001: MGRPPCCDKE GVKKGPWTPE EDLVLVSYVQ EHGPGNWRAV PTRTGLMRCS KSCRLRWTNY LRPGIKRGNF TDQEEKLIVH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKRKLQAGG DAAAKPAAQR PASSSKGQWE RRLQTDINMA RRALREALTT LDDIKRQQPD AADGVNGPAA AGADSGSPAA SSSSAASLSQ
201: CSPSAAGPYV LTTANISRML DGWVSKGRSA VPAADSPSGS SASEVSYGSG AAARALGSAF EYDRKPAVLA PDQTQLNAIE TWLFADDNSN NDHHGHGGGG
301: SGLLGVPATL GYPF

Best Arabidopsis Sequence Match ( AT3G47600.1 )
(BLAST)

001: MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMILH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF

Arabidopsis Description

MYB94Transcription factor MYB94 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN78]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.