Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73103 | Canola | nucleus | 71.98 | 45.02 |
| CDX68173 | Canola | nucleus | 70.05 | 44.89 |
| CDX85848 | Canola | nucleus | 69.57 | 44.44 |
| CDX96557 | Canola | nucleus | 69.08 | 42.94 |
| CDX87250 | Canola | nucleus | 32.85 | 20.3 |
| CDY69264 | Canola | nucleus | 31.88 | 19.88 |
| CDY16773 | Canola | nucleus | 26.09 | 18.31 |
| GSMUA_Achr7P21010_001 | Banana | nucleus | 22.22 | 17.1 |
| CDX95031 | Canola | nucleus, plastid | 12.56 | 16.77 |
| CDY30719 | Canola | nucleus | 20.77 | 16.04 |
| GSMUA_Achr7P18080_001 | Banana | nucleus | 20.29 | 15.56 |
| GSMUA_Achr2P22010_001 | Banana | nucleus | 18.84 | 15.41 |
| GSMUA_Achr6P10700_001 | Banana | nucleus | 18.36 | 14.84 |
| GSMUA_Achr4P00480_001 | Banana | nucleus | 18.84 | 14.72 |
| CDX86406 | Canola | nucleus | 23.67 | 14.71 |
| CDX86405 | Canola | nucleus | 23.67 | 14.71 |
| CDX85227 | Canola | nucleus | 23.67 | 14.71 |
| CDY00107 | Canola | nucleus | 23.67 | 14.5 |
| CDY00289 | Canola | nucleus | 19.32 | 14.44 |
| KXG39272 | Sorghum | nucleus | 21.74 | 14.11 |
| CDY32135 | Canola | nucleus | 17.87 | 13.86 |
| CDY44428 | Canola | nucleus | 21.74 | 13.8 |
| CDY04044 | Canola | nucleus | 20.77 | 13.69 |
| CDY31125 | Canola | nucleus | 17.39 | 13.58 |
| GSMUA_Achr8P01400_001 | Banana | nucleus | 16.91 | 13.31 |
| GSMUA_Achr6P02690_001 | Banana | nucleus | 15.94 | 13.2 |
| Zm00001d047182_P001 | Maize | nucleus | 19.81 | 12.89 |
| TraesCS2B01G183100.1 | Wheat | nucleus | 18.36 | 12.14 |
| TraesCS2D01G163700.1 | Wheat | nucleus | 18.36 | 12.14 |
| TraesCS2A01G157600.1 | Wheat | nucleus | 17.87 | 11.78 |
| OQU90312 | Sorghum | nucleus | 18.36 | 11.59 |
| Zm00001d022227_P002 | Maize | nucleus | 17.87 | 11.21 |
| OQU93155 | Sorghum | nucleus | 4.35 | 6.77 |
| Os07t0629000-01 | Rice | nucleus | 3.86 | 5.26 |
| CDX74943 | Canola | nucleus | 7.25 | 4.1 |
| CDX91374 | Canola | nucleus | 6.76 | 3.92 |
| GSMUA_Achr8P16920_001 | Banana | nucleus | 1.93 | 3.54 |
| CDY07778 | Canola | nucleus | 5.8 | 3.46 |
| CDX79747 | Canola | nucleus | 5.8 | 3.45 |
| HORVU2Hr1G028470.1 | Barley | nucleus, plastid | 1.45 | 1.19 |
| CDX93535 | Canola | nucleus | 0.0 | 0.0 |
| CDX95030 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY64733 | EnsemblPlantsGene:GSBRNA2T00042629001 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF922 | ProteinID:CDY64733 | ProteinID:CDY64733.1 |
| SEG:seg | UniParc:UPI0004EE2B3D | UniProt:A0A078JB04 | MapMan:35.2 | : | : |
Description
BnaUnng00920DBnaUnng00920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB04]
Coordinates
chrLK034534:+:215..1004
Molecular Weight (calculated)
22603.5 Da
IEP (calculated)
4.049
GRAVY (calculated)
-0.746
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEIPSCNIH NNSCNNNNNK RVVNKGQWEK KLQTDINMAK QALLQALSLD QPSSSIPPDP DSSETHHSAT STYASSTDNI FKLLQNWTSS SSSIPNTSSH
101: SMNRGLSTGE VGVLDHQSLF SSHSESGSVD GKLNLMTETS MFKDGSEPNG DIEATTDATT DDHGSLSLIE QWLFDEQGIC QCDGNQEDLI EVSFEGIDND
201: NNDQDLF
101: SMNRGLSTGE VGVLDHQSLF SSHSESGSVD GKLNLMTETS MFKDGSEPNG DIEATTDATT DDHGSLSLIE QWLFDEQGIC QCDGNQEDLI EVSFEGIDND
201: NNDQDLF
001: MSTLKIRWAA IASYLPQRTD NDIKNYWNTH LKKKLVMMKF QNGIINENKT NLATDISSCN NNNNGCNHNK RTTNKGQWEK KLQTDINMAK QALFQALSLD
101: QPSSLIPPDP DSPKPHHHST TTYASSTDNI SKLLQNWTSS SSSKPNTSSV SNNRSSSPGE GGLFDHHSLF SSNSESGSVD EKLNLMSETS MFKGESKPDI
201: DMEATPTTTT TDDQGSLSLI EKWLFDDQGL VQCDDSQEDL IDVSLEELK
101: QPSSLIPPDP DSPKPHHHST TTYASSTDNI SKLLQNWTSS SSSKPNTSSV SNNRSSSPGE GGLFDHHSLF SSNSESGSVD EKLNLMSETS MFKGESKPDI
201: DMEATPTTTT TDDQGSLSLI EKWLFDDQGL VQCDDSQEDL IDVSLEELK
Arabidopsis Description
ATY13At1g74650 [Source:UniProtKB/TrEMBL;Acc:Q9CA52]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.