Factsheet for Os11t0558200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053124_P001	Maize	nucleus	64.24	73.36
EES09957	Sorghum	nucleus	64.24	71.62
Os07t0629000-01	Rice	nucleus	31.82	69.08
HORVU5Hr1G123880.1	Barley	nucleus	47.58	55.67
TraesCS4A01G322200.1	Wheat	nucleus	46.97	54.96
TraesCS5D01G552200.1	Wheat	nucleus	46.97	54.96
TraesCS5B01G556300.1	Wheat	nucleus	46.67	54.61
Os12t0125000-01	Rice	nucleus	41.21	43.73
Os08t0437300-00	Rice	nucleus	34.55	43.51
Os11t0128500-01	Rice	nucleus	40.61	43.51
Os07t0484700-01	Rice	nucleus	20.91	41.32
Os12t0572000-01	Rice	nucleus	18.79	18.13

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4350727	ProteinID:ABA94293.1	EMBL:AK110844	ProteinID:BAF28459.1
ProteinID:BAT14463.1	ProteinID:EAZ18740.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os11g0558200	EnsemblPlants:Os11t0558200-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF726	UniProt:Q2R2L6	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000068205E
RefSeq:XP_015618031.1	SEG:seg	:	:	:	:

Description

R2R3-MYB, OsMYB4PR2R3-type MYB transcriptional activator, Tolerance to Pi deficiency (Os11t0558200-01)

Coordinates

chr11:-:20735117..20737678

Molecular Weight (calculated)

36063.2 Da

IEP (calculated)

6.742

GRAVY (calculated)

-0.560

Length

330 amino acids

Sequence
(BLAST)

001: MGRPPCCDNG VGVKKGPWTP EEDIILVSYI QQHGPGNWRS VPENTGLMRC SKSCRLRWTN YLRPGIKRGN FTPHEEGIII HLQALLGNKW AAIASYLPQR
101: TDNDIKNYWN THLKKKVKRL QQQQQSHPDH HHHHSFQTTP SSSNAAAVAT TSPNYYNPNN SNSNSSNYLH NNNHNLESMQ SMATAPSNEA TTIPKLFQFQ
201: TWMKPSPATT SSAATAAAGS CYKQAMAMQE LQEEQEGSAA AAAMASSIDG VSKDQDYHMC AVISGDDKSS SSEMMTAAAM AGHGEAATTT FSLLENWLLD
301: DMPGQAAMSA AMDGFLEISA GYCCADPIMF

Best Arabidopsis Sequence Match ( AT1G08810.1 )
(BLAST)

001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML

Arabidopsis Description

MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.