Factsheet for Os12t0572000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

nucleus: 15276429

msms PMID: 15276429 doi

MM Khan, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba 305-8602, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0889400-02
Os03t0213900-02
Os03t0612400-00
Os03t0854800-03
Os05t0417000-00
Os10t0577800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37630.1	Os03t0854800-03	AT1G32230.1	19548978
AT2G37630.1	Os10t0577800-01	AT1G32230.1	19548978
AT2G37630.1	Os01t0889400-02	AT1G65620.1	19228338
AT2G37630.1	Os05t0417000-00	AT1G65620.1	19228338
AT2G37630.1	Os03t0213900-02	AT3G29390.1	16243907
AT2G37630.1	Os03t0612400-00	AT5G66870.1	16243907

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G077530.1	Barley	mitochondrion, nucleus	36.26	74.7
TraesCS5A01G079100.1	Wheat	nucleus	73.68	73.47
HORVU5Hr1G021230.1	Barley	mitochondrion, nucleus	74.27	70.17
TraesCS5D01G093100.1	Wheat	mitochondrion, nucleus	73.98	70.08
TraesCS5B01G086900.1	Wheat	mitochondrion, nucleus	73.98	69.7
GSMUA_Achr7P10550_001	Banana	nucleus	58.48	65.36
Zm00001d030737_P001	Maize	nucleus	69.88	64.59
GSMUA_Achr9P28330_001	Banana	nucleus	59.65	63.35
EES17234	Sorghum	nucleus	69.88	62.73
VIT_08s0007g00410.t01	Wine grape	nucleus	62.57	59.78
Solyc09g010840.1.1	Tomato	nucleus	61.11	58.06
KRG99949	Soybean	nucleus	59.94	57.42
PGSC0003DMT400022771	Potato	nucleus	60.53	57.34
Bra000011.1-P	Field mustard	nucleus	57.89	57.06
CDY07778	Canola	nucleus	57.89	57.06
KRH49100	Soybean	nucleus	59.94	56.79
CDX79747	Canola	nucleus	56.73	55.75
GSMUA_Achr9P03320_001	Banana	nucleus	44.44	55.07
KRG99521	Soybean	nucleus	56.14	54.55
CDX91374	Canola	nucleus	56.73	54.34
KRH66092	Soybean	nucleus	56.14	53.78
Bra005177.1-P	Field mustard	nucleus	56.73	53.74
AT2G37630.1	Thale cress	nucleus	57.6	53.68
CDX74943	Canola	nucleus	57.02	53.28
HORVU5Hr1G112000.2	Barley	extracellular, nucleus	40.64	47.12
HORVU6Hr1G071420.2	Barley	plastid	21.05	39.13
Os07t0629000-01	Rice	nucleus	15.5	34.87
GSMUA_Achr5P29070_001	Banana	nucleus	59.65	34.69
Os08t0437300-00	Rice	nucleus	18.71	24.43
Os07t0484700-01	Rice	nucleus	10.53	21.56
Os11t0558200-01	Rice	nucleus	18.13	18.79
Os12t0125000-01	Rice	nucleus	16.08	17.68
Os11t0128500-01	Rice	nucleus	15.79	17.53

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4352588	EMBL:AB064519	ProteinID:ABA99670.1	ProteinID:ABG22057.1
EMBL:AP014968	ProteinID:BAB68270.1	ProteinID:BAF30108.1	ncoils:Coil	UniProt:F4MGP4	GO:GO:0000793
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008356	GO:GO:0009058	GO:GO:0009605
GO:GO:0009607	GO:GO:0009615	GO:GO:0009628	GO:GO:0009651	GO:GO:0009653	GO:GO:0009719
GO:GO:0009733	GO:GO:0009739	GO:GO:0009751	GO:GO:0009753	GO:GO:0009944	GO:GO:0009965
GO:GO:0009987	GO:GO:0010338	GO:GO:0016020	GO:GO:0016021	GO:GO:0030154	GO:GO:0042742
GO:GO:0042803	GO:GO:0043565	GO:GO:0044212	GO:GO:0045088	GO:GO:0045892	GO:GO:0046686
GO:GO:0050832	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os12g0572000	EnsemblPlants:Os12t0572000-01
PFAM:PF13921	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF457	UniProt:Q94IB1	InterPro:RS2/AS1
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00000AA0E7	RefSeq:XP_015620377.1	RefSeq:XP_015620378.1
SEG:seg	:	:	:	:	:

Description

OsMYB91, OsRS2R2R3-type MYB transcription factor, Adaptive growth, Salt tolerance (Os12t0572000-01)

Coordinates

chr12:-:23554928..23560551

Molecular Weight (calculated)

39043.7 Da

IEP (calculated)

10.278

GRAVY (calculated)

-0.902

Length

342 amino acids

Sequence
(BLAST)

001: MQPPPMRERQ RWRPEEDAIL LAYVRQYGPR EWSLVSQRMN RPLHRDAKSC LERWKNYLRP GIKKGSLTDD EQRLVIRLQA KHGNKWKKIA AEVPGRTAKR
101: LGKWWEVFKE KQQRELRDRD RRRLPPPLDG DERGCAGGRY DWLLEDFADK LVNDHHRRMM AAPILPPWMS SSPSSSSSPS VTLSLASAAV APAPAAPPPT
201: WGGGGGGEVV VAELMECCRE MEEGQRAWAA HRKEAAWRMK RVEMQLETER ACRRREATEE FEAKMRALRE EQAAAVERVE AEYREKMAGL RRDAEAKEQK
301: MAEQWAAKHA RLAKFLDQVA ACRRWPPVEI NGGGGGGPGG GR

Best Arabidopsis Sequence Match ( AT2G37630.1 )
(BLAST)

001: MKERQRWSGE EDALLRAYVR QFGPREWHLV SERMNKPLNR DAKSCLERWK NYLKPGIKKG SLTEEEQRLV IRLQEKHGNK WKKIAAEVPG RTAKRLGKWW
101: EVFKEKQQRE EKESNKRVEP IDESKYDRIL ESFAEKLVKE RSNVVPAAAA AATVVMANSN GGFLHSEQQV QPPNPVIPPW LATSNNGNNV VARPPSVTLT
201: LSPSTVAAAA PQPPIPWLQQ QQPERAENGP GGLVLGSMMP SCSGSSESVF LSELVECCRE LEEGHRAWAD HKKEAAWRLR RLELQLESEK TCRQREKMEE
301: IEAKMKALRE EQKNAMEKIE GEYREQLVGL RRDAEAKDQK LADQWTSRHI RLTKFLEQQM GCRLDRP

Arabidopsis Description

AS1Transcription factor AS1 [Source:UniProtKB/Swiss-Prot;Acc:O80931]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.