Factsheet for HORVU7Hr1G077530.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G014460.1
HORVU1Hr1G050960.7
HORVU1Hr1G064640.3
HORVU3Hr1G090240.2
HORVU3Hr1G090250.5
HORVU4Hr1G013630.2
HORVU4Hr1G067960.4
HORVU5Hr1G124010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37630.1	HORVU0Hr1G014460.1	AT1G32230.1	19548978
AT2G37630.1	HORVU1Hr1G050960.7	AT1G32230.1	19548978
AT2G37630.1	HORVU5Hr1G124010.1	AT1G32230.1	19548978
AT2G37630.1	HORVU1Hr1G064640.3	AT1G65620.1	19228338
AT2G37630.1	HORVU3Hr1G090240.2	AT1G65620.1	19228338
AT2G37630.1	HORVU3Hr1G090250.5	AT1G65620.1	19228338
AT2G37630.1	HORVU4Hr1G067960.4	AT3G29390.1	16243907
AT2G37630.1	HORVU4Hr1G013630.2	AT5G66870.1	16243907

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G079100.1	Wheat	nucleus	91.57	44.31
HORVU5Hr1G021230.1	Barley	mitochondrion, nucleus	93.98	43.09
TraesCS5D01G093100.1	Wheat	mitochondrion, nucleus	93.37	42.94
TraesCS5B01G086900.1	Wheat	mitochondrion, nucleus	93.37	42.7
GSMUA_Achr9P03320_001	Banana	nucleus	68.67	41.3
Zm00001d030737_P001	Maize	nucleus	82.53	37.03
GSMUA_Achr7P10550_001	Banana	nucleus	66.87	36.27
Os12t0572000-01	Rice	nucleus	74.7	36.26
EES17234	Sorghum	nucleus	81.33	35.43
GSMUA_Achr9P28330_001	Banana	nucleus	68.07	35.09
VIT_08s0007g00410.t01	Wine grape	nucleus	71.69	33.24
KRG99521	Soybean	nucleus	69.88	32.95
Bra000011.1-P	Field mustard	nucleus	65.66	31.41
CDY07778	Canola	nucleus	65.66	31.41
Solyc09g010840.1.1	Tomato	nucleus	68.07	31.39
KRH66092	Soybean	nucleus	67.47	31.37
PGSC0003DMT400022771	Potato	nucleus	68.07	31.3
KRG99949	Soybean	nucleus	66.27	30.81
CDX79747	Canola	nucleus	64.46	30.75
CDX91374	Canola	nucleus	65.66	30.53
Bra005177.1-P	Field mustard	nucleus	65.66	30.19
KRH49100	Soybean	nucleus	65.66	30.19
HORVU5Hr1G112000.2	Barley	extracellular, nucleus	53.01	29.83
CDX74943	Canola	nucleus	65.66	29.78
AT2G37630.1	Thale cress	nucleus	65.66	29.7
GSMUA_Achr5P29070_001	Banana	nucleus	68.07	19.22
HORVU2Hr1G028470.1	Barley	nucleus, plastid	26.51	17.46
HORVU5Hr1G123880.1	Barley	nucleus	29.52	17.38
HORVU4Hr1G023510.2	Barley	nucleus	28.31	15.56
HORVU5Hr1G045540.1	Barley	nucleus	28.31	14.37
HORVU5Hr1G045550.1	Barley	nucleus	28.31	12.98
HORVU6Hr1G071420.2	Barley	plastid	3.61	3.26

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	UniProt:A0A287WZE5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009987	GO:GO:0010338	EnsemblPlantsGene:HORVU7Hr1G077530	EnsemblPlants:HORVU7Hr1G077530.1	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	PFAM:PF13921	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF457	InterPro:RS2/AS1
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000B4777F0	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:-:454974731..454975809

Molecular Weight (calculated)

19892.9 Da

IEP (calculated)

10.314

GRAVY (calculated)

-1.124

Length

166 amino acids

Sequence
(BLAST)

001: MERKERQRWR REEDAILCSY VRQYGPREWN LLAQRMNAPL DRDAKSCLER WKNYLRPGIK KGSLTDDEQR LVICLQAKHD NKWKKIAAEV PGRTAKRLGN
101: WWEVFKEKQQ REIRDSRRPP PEPSPDERGR YEWLLENFAE KLVKERQQVG AAPLHHHLMA VSMLPP

Best Arabidopsis Sequence Match ( AT2G37630.1 )
(BLAST)

001: MKERQRWSGE EDALLRAYVR QFGPREWHLV SERMNKPLNR DAKSCLERWK NYLKPGIKKG SLTEEEQRLV IRLQEKHGNK WKKIAAEVPG RTAKRLGKWW
101: EVFKEKQQRE EKESNKRVEP IDESKYDRIL ESFAEKLVKE RSNVVPAAAA AATVVMANSN GGFLHSEQQV QPPNPVIPPW LATSNNGNNV VARPPSVTLT
201: LSPSTVAAAA PQPPIPWLQQ QQPERAENGP GGLVLGSMMP SCSGSSESVF LSELVECCRE LEEGHRAWAD HKKEAAWRLR RLELQLESEK TCRQREKMEE
301: IEAKMKALRE EQKNAMEKIE GEYREQLVGL RRDAEAKDQK LADQWTSRHI RLTKFLEQQM GCRLDRP

Arabidopsis Description

AS1Transcription factor AS1 [Source:UniProtKB/Swiss-Prot;Acc:O80931]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.