Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07778 | Canola | nucleus | 86.38 | 91.35 |
| Bra000011.1-P | Field mustard | nucleus | 86.38 | 91.35 |
| CDX91374 | Canola | nucleus | 88.56 | 91.04 |
| CDX79747 | Canola | nucleus | 85.56 | 90.23 |
| Bra005177.1-P | Field mustard | nucleus | 88.01 | 89.47 |
| CDX74943 | Canola | nucleus | 88.01 | 88.25 |
| VIT_08s0007g00410.t01 | Wine grape | nucleus | 71.12 | 72.91 |
| Solyc09g010840.1.1 | Tomato | nucleus | 68.12 | 69.44 |
| KRG99949 | Soybean | nucleus | 67.03 | 68.91 |
| PGSC0003DMT400022771 | Potato | nucleus | 67.57 | 68.7 |
| GSMUA_Achr7P10550_001 | Banana | nucleus | 56.68 | 67.97 |
| KRH49100 | Soybean | nucleus | 66.48 | 67.59 |
| HORVU7Hr1G077530.1 | Barley | mitochondrion, nucleus | 29.7 | 65.66 |
| KRH66092 | Soybean | nucleus | 63.76 | 65.55 |
| KRG99521 | Soybean | nucleus | 62.13 | 64.77 |
| GSMUA_Achr9P28330_001 | Banana | nucleus | 56.13 | 63.98 |
| TraesCS5A01G079100.1 | Wheat | nucleus | 56.13 | 60.06 |
| GSMUA_Achr9P03320_001 | Banana | nucleus | 44.69 | 59.42 |
| Os12t0572000-01 | Rice | nucleus | 53.68 | 57.6 |
| HORVU5Hr1G021230.1 | Barley | mitochondrion, nucleus | 56.68 | 57.46 |
| TraesCS5D01G093100.1 | Wheat | mitochondrion, nucleus | 56.4 | 57.34 |
| TraesCS5B01G086900.1 | Wheat | mitochondrion, nucleus | 56.68 | 57.3 |
| Zm00001d030737_P001 | Maize | nucleus | 53.95 | 53.51 |
| EES17234 | Sorghum | nucleus | 55.04 | 53.02 |
| HORVU5Hr1G112000.2 | Barley | extracellular, nucleus | 32.97 | 41.02 |
| GSMUA_Achr5P29070_001 | Banana | nucleus | 57.77 | 36.05 |
| HORVU6Hr1G071420.2 | Barley | plastid | 16.62 | 33.15 |
| AT1G08810.1 | Thale cress | nucleus | 15.26 | 20.0 |
| AT3G28910.1 | Thale cress | nucleus | 16.62 | 18.89 |
| AT1G74650.1 | Thale cress | nucleus | 16.08 | 17.88 |
| AT3G47600.1 | Thale cress | nucleus | 16.08 | 17.72 |
| AT5G62470.2 | Thale cress | nucleus | 15.8 | 16.48 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:818340 | UniProt:A0A178W165 | ProteinID:AAC23633.1 | ProteinID:AEC09428.1 |
| EMBL:AF175996 | ArrayExpress:AT2G37630 | EnsemblPlantsGene:AT2G37630 | RefSeq:AT2G37630 | TAIR:AT2G37630 | RefSeq:AT2G37630-TAIR-G |
| EnsemblPlants:AT2G37630.1 | TAIR:AT2G37630.1 | Symbol:ATPHAN | EMBL:AY519578 | EMBL:BT026027 | ncoils:Coil |
| GO:GO:0000003 | GO:GO:0000793 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006357 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008356 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009739 | GO:GO:0009751 | GO:GO:0009753 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009944 | GO:GO:0009965 | GO:GO:0009987 | GO:GO:0010338 |
| GO:GO:0030154 | GO:GO:0042742 | GO:GO:0042803 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045088 |
| GO:GO:0045892 | GO:GO:0046686 | GO:GO:0050832 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| RefSeq:NP_181299.1 | UniProt:O80931 | ProteinID:OAP11305.1 | PFAM:PF13921 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005022 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025272 | PO:PO:0025281 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF457 | InterPro:RS2/AS1 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000009EB29 | SEG:seg | : | : | : |
Description
AS1Transcription factor AS1 [Source:UniProtKB/Swiss-Prot;Acc:O80931]
Coordinates
chr2:-:15781232..15783480
Molecular Weight (calculated)
42245.4 Da
IEP (calculated)
9.555
GRAVY (calculated)
-0.901
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MKERQRWSGE EDALLRAYVR QFGPREWHLV SERMNKPLNR DAKSCLERWK NYLKPGIKKG SLTEEEQRLV IRLQEKHGNK WKKIAAEVPG RTAKRLGKWW
101: EVFKEKQQRE EKESNKRVEP IDESKYDRIL ESFAEKLVKE RSNVVPAAAA AATVVMANSN GGFLHSEQQV QPPNPVIPPW LATSNNGNNV VARPPSVTLT
201: LSPSTVAAAA PQPPIPWLQQ QQPERAENGP GGLVLGSMMP SCSGSSESVF LSELVECCRE LEEGHRAWAD HKKEAAWRLR RLELQLESEK TCRQREKMEE
301: IEAKMKALRE EQKNAMEKIE GEYREQLVGL RRDAEAKDQK LADQWTSRHI RLTKFLEQQM GCRLDRP
101: EVFKEKQQRE EKESNKRVEP IDESKYDRIL ESFAEKLVKE RSNVVPAAAA AATVVMANSN GGFLHSEQQV QPPNPVIPPW LATSNNGNNV VARPPSVTLT
201: LSPSTVAAAA PQPPIPWLQQ QQPERAENGP GGLVLGSMMP SCSGSSESVF LSELVECCRE LEEGHRAWAD HKKEAAWRLR RLELQLESEK TCRQREKMEE
301: IEAKMKALRE EQKNAMEKIE GEYREQLVGL RRDAEAKDQK LADQWTSRHI RLTKFLEQQM GCRLDRP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.