Factsheet for AT5G62470.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00289	Canola	nucleus	71.31	90.61
CDY30719	Canola	nucleus	66.48	87.31
Bra029258.1-P	Field mustard	nucleus	84.94	87.17
CDY69264	Canola	nucleus	81.82	86.75
CDX87250	Canola	nucleus	80.68	84.78
CDY16773	Canola	nucleus	71.02	84.75
Bra035893.1-P	Field mustard	nucleus	80.4	84.48
AT3G47600.1	Thale cress	nucleus	69.32	73.27
Bra010085.1-P	Field mustard	nucleus	85.8	67.41
KRG94429	Soybean	nucleus	16.19	66.28
AT1G74650.1	Thale cress	nucleus	50.85	54.24
AT3G28910.1	Thale cress	nucleus	49.72	54.18
KRH40103	Soybean	nucleus	50.0	53.01
KRH01168	Soybean	nucleus	49.72	52.4
KRG93528	Soybean	nucleus	49.15	51.34
KRH18478	Soybean	nucleus	48.3	51.05
KRH66212	Soybean	cytosol	20.74	48.34
AT1G08810.1	Thale cress	nucleus	37.78	47.5
AT2G37630.1	Thale cress	nucleus	16.48	15.8

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:836367	ProteinID:AED97610.1	ProteinID:AED97611.1	EMBL:AF176001
EMBL:AJ011669	EMBL:AK228977	ArrayExpress:AT5G62470	EnsemblPlantsGene:AT5G62470	RefSeq:AT5G62470	TAIR:AT5G62470
RefSeq:AT5G62470-TAIR-G	EnsemblPlants:AT5G62470.2	TAIR:AT5G62470.2	EMBL:AY519645	Unigene:At.9303	ProteinID:BAB11497.1
EMBL:BT024888	GO:GO:0000003	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0006629
GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009737	GO:GO:0009738	GO:GO:0009751	GO:GO:0009787	GO:GO:0009791
GO:GO:0009987	GO:GO:0010025	GO:GO:0010115	GO:GO:0010468	GO:GO:0019748	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	GO:GO:0045893	GO:GO:1904278	GO:GO:2000033	InterPro:Homeobox-like_sf
InterPro:IPR017930	Symbol:MYB96	InterPro:Myb_dom	RefSeq:NP_201053.2	RefSeq:NP_851248.1	PFAM:PF00249
PO:PO:0000013	PO:PO:0000027	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF902	UniProt:Q24JK1	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000019714A	SEG:seg	:	:	:

Description

MYB96Transcription factor MYB96 [Source:UniProtKB/Swiss-Prot;Acc:Q24JK1]

Coordinates

chr5:-:25078991..25081141

Molecular Weight (calculated)

39189.6 Da

IEP (calculated)

6.054

GRAVY (calculated)

-0.693

Length

352 amino acids

Sequence
(BLAST)

001: MGRPPCCEKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKTIVH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKIN ESGEEDNDGV SSSNTSSQKN HQSTNKGQWE RRLQTDINMA KQALCEALSL DKPSSTLSSS SSLPTPVITQ QNIRNFSSAL
201: LDRCYDPSSS SSSTTTTTTS NTTNPYPSGV YASSAENIAR LLQDFMKDTP KALTLSSSSP VSETGPLTAA VSEEGGEGFE QSFFSFNSMD ETQNLTQETS
301: FFHDQVIKPE ITMDQDHGLI SQGSLSLFEK WLFDEQSHEM VGMALAGQEG MF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.