Factsheet for AT3G47600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G62470.2	Thale cress	nucleus	73.27	69.32
KRG94429	Soybean	nucleus	17.42	67.44
AT1G74650.1	Thale cress	nucleus	53.45	53.94
AT3G28910.1	Thale cress	nucleus	51.65	53.25
KRH40103	Soybean	nucleus	51.65	51.81
KRH01168	Soybean	nucleus	51.95	51.8
AT1G08810.1	Thale cress	nucleus	42.34	50.36
KRH18478	Soybean	nucleus	49.55	49.55
KRG93528	Soybean	nucleus	49.85	49.26
KRH66212	Soybean	cytosol	22.22	49.01
AT2G37630.1	Thale cress	nucleus	17.72	16.08

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:823914	ProteinID:AEE78306.1	EMBL:AF062918	ArrayExpress:AT3G47600
EnsemblPlantsGene:AT3G47600	RefSeq:AT3G47600	TAIR:AT3G47600	RefSeq:AT3G47600-TAIR-G	EnsemblPlants:AT3G47600.1	TAIR:AT3G47600.1
EMBL:AY519595	Unigene:At.21591	EMBL:BT002802	EMBL:BT004361	ProteinID:CAB61986.1	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009723
GO:GO:0009733	GO:GO:0009737	GO:GO:0009751	GO:GO:0009753	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	GO:GO:0045893	GO:GO:0046686	GO:GO:0080167	GO:GO:1904278
InterPro:Homeobox-like_sf	InterPro:IPR017930	Symbol:MYB94	InterPro:Myb_dom	RefSeq:NP_190344.1	PFAM:PF00249
PO:PO:0000013	PO:PO:0000037	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF902	UniProt:Q9SN78	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000000BDCF	SEG:seg	:	:	:	:

Description

MYB94Transcription factor MYB94 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN78]

Coordinates

chr3:-:17539289..17541307

Molecular Weight (calculated)

37145.5 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.684

Length

333 amino acids

Sequence
(BLAST)

001: MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMILH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.