CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94429	Soybean	nucleus	36.42	63.95
KRH37834	Soybean	nucleus	39.07	50.0
CDY30719	Canola	nucleus	48.34	27.24
CDY00289	Canola	nucleus	49.01	26.71
CDY16773	Canola	nucleus	49.67	25.42
KRH56914	Soybean	nucleus	50.33	23.82
KRH63348	Soybean	nucleus	49.67	23.51
KRH03474	Soybean	nucleus	49.67	23.08
KRH40103	Soybean	nucleus	50.33	22.89
KRH01168	Soybean	nucleus	50.33	22.75
Bra035893.1-P	Field mustard	nucleus	50.33	22.69
CDX87250	Canola	nucleus	50.33	22.69
KRH54550	Soybean	nucleus	49.01	22.22
AT3G47600.1	Thale cress	nucleus	49.01	22.22
KRH18478	Soybean	nucleus	49.01	22.22
CDY69264	Canola	nucleus	48.34	21.99
KRG93528	Soybean	nucleus	49.01	21.96
Bra029258.1-P	Field mustard	nucleus	49.01	21.57
KRG94936	Soybean	nucleus	49.67	21.55
KRH64960	Soybean	nucleus	49.67	20.83
AT5G62470.2	Thale cress	nucleus	48.34	20.74
Bra010085.1-P	Field mustard	nucleus	49.01	16.52
KRH66092	Soybean	nucleus	23.84	10.08
KRG99521	Soybean	nucleus	23.18	9.94
KRG99949	Soybean	nucleus	22.52	9.52
KRH49100	Soybean	nucleus	22.52	9.42

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EMBL:ACUP02001923	EnsemblPlantsGene:GLYMA_03G090800	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	UniProt:K7KDY6	EnsemblPlants:KRH66212	ProteinID:KRH66212	ProteinID:KRH66212.1	PFscan:PS51257
PANTHER:PTHR10641	PANTHER:PTHR10641:SF715	SUPFAM:SSF46689	UniParc:UPI0002962AE8	:	:

Description

hypothetical protein

Coordinates

chr3:-:26974147..26975370

Molecular Weight (calculated)

17172.0 Da

IEP (calculated)

7.787

GRAVY (calculated)

-0.052

Length

151 amino acids

Sequence
(BLAST)

001: MCKSEGMPAS IMPAEPSTLH IILVSCIQEH GPGNWRVVPT KIGLSRCSKS YRLRSTNYLR PGIKRGNIIE QEEKMIIHLQ DLLGNIISIW EMGCNSFISS
101: TEKAWIYHFV SNLDKSCLEL VYEIKVCICW ATLLDSHGIF KSHKQLFDES S

Best Arabidopsis Sequence Match ( AT3G47600.1 )
(BLAST)

001: MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMILH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF

Arabidopsis Description

MYB94Transcription factor MYB94 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN78]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.