CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03474	Soybean	nucleus	93.42	91.69
KRG94429	Soybean	nucleus	18.5	68.6
KRH63348	Soybean	nucleus	67.08	67.08
KRH54550	Soybean	nucleus	68.97	66.07
KRH37834	Soybean	nucleus	23.51	63.56
Solyc03g116100.2.1	Tomato	nucleus	61.76	59.16
PGSC0003DMT400050287	Potato	nucleus	61.44	58.16
AT1G74650.1	Thale cress	nucleus	55.8	53.94
CDX73103	Canola	nucleus	55.17	53.17
PGSC0003DMT400083076	Potato	nucleus	62.07	52.8
Solyc06g069850.2.1	Tomato	nucleus	62.38	52.79
CDX85848	Canola	nucleus	53.6	52.78
KRH40103	Soybean	nucleus	54.86	52.71
KRH01168	Soybean	nucleus	54.86	52.4
CDX68173	Canola	nucleus	52.98	52.32
Bra015899.1-P	Field mustard	nucleus	53.92	51.65
CDX96557	Canola	nucleus	53.92	51.65
Bra003793.1-P	Field mustard	nucleus	54.55	51.48
KRH18478	Soybean	nucleus	52.98	50.75
KRH66212	Soybean	cytosol	23.82	50.33
KRG93528	Soybean	nucleus	52.66	49.85
Bra008160.1-P	Field mustard	nucleus	52.04	48.97
KRG94936	Soybean	nucleus	48.9	44.83
KRH64960	Soybean	nucleus	49.22	43.61
KRH66092	Soybean	nucleus	20.69	18.49
KRG99521	Soybean	nucleus	20.38	18.47
KRG99949	Soybean	nucleus	20.38	18.21
KRH49100	Soybean	nucleus	20.06	17.73

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100799402	MapMan:15.5.2.1	EMBL:ACUP02002801	EnsemblPlantsGene:GLYMA_05G027000	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	UniProt:I1JZP7	InterPro:IPR017930	EnsemblPlants:KRH56914	ProteinID:KRH56914
ProteinID:KRH56914.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF906
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000233A9D7	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:2337931..2339846

Molecular Weight (calculated)

35350.0 Da

IEP (calculated)

7.625

GRAVY (calculated)

-0.805

Length

319 amino acids

Sequence
(BLAST)

001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EQGPGNWRAV PTNTGLMRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMIIH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLKQSG SDEGVDQEGH SSSSSSNSHP KGQWERRLQT DIQMAKKALC DALSLHKPAT ATATNLVVPD DATKPSSTSH QPYKHASSSY
201: ASSYENISRL MENWMKSPNS NSTNNSPGYY SSSFSNMVNN NTTTGSSSSE GAHSNTTTTT QDQGFDSLLT LNSSKHHGSS SQTQVPLTLL ENWLFDDGAA
301: QCHEDLMNMS LEESTAGLF

Best Arabidopsis Sequence Match ( AT3G47600.1 )
(BLAST)

001: MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMILH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF

Arabidopsis Description

MYB94Transcription factor MYB94 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN78]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.