CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63348	Soybean	nucleus	88.89	92.79
KRH56914	Soybean	nucleus	66.07	68.97
KRG94429	Soybean	nucleus	17.42	67.44
KRH03474	Soybean	nucleus	65.77	67.38
KRH37834	Soybean	nucleus	21.92	61.86
Solyc03g116100.2.1	Tomato	nucleus	60.66	60.66
PGSC0003DMT400050287	Potato	nucleus	60.96	60.24
AT1G74650.1	Thale cress	nucleus	56.46	56.97
CDX73103	Canola	nucleus	55.56	55.89
Bra015899.1-P	Field mustard	nucleus	55.26	55.26
CDX96557	Canola	nucleus	55.26	55.26
CDX85848	Canola	nucleus	53.45	54.94
CDX68173	Canola	nucleus	52.55	54.18
PGSC0003DMT400083076	Potato	nucleus	60.96	54.13
Solyc06g069850.2.1	Tomato	nucleus	60.96	53.85
Bra003793.1-P	Field mustard	nucleus	54.35	53.55
KRH40103	Soybean	nucleus	53.15	53.31
KRH01168	Soybean	nucleus	53.45	53.29
KRH18478	Soybean	nucleus	51.95	51.95
Bra008160.1-P	Field mustard	nucleus	52.55	51.62
KRG93528	Soybean	nucleus	51.95	51.34
KRH66212	Soybean	cytosol	22.22	49.01
KRG94936	Soybean	nucleus	48.05	45.98
KRH64960	Soybean	nucleus	48.35	44.72
KRG99949	Soybean	nucleus	21.32	19.89
KRG99521	Soybean	nucleus	21.02	19.89
KRH49100	Soybean	nucleus	21.02	19.39
KRH66092	Soybean	nucleus	20.72	19.33

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100794319	MapMan:15.5.2.1	EMBL:ACUP02003540	EnsemblPlantsGene:GLYMA_06G193600	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7KVY8	ProteinID:KRH54549.1	EnsemblPlants:KRH54550
ProteinID:KRH54550	ProteinID:KRH54550.1	EMBL:KU664645	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF922	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00023395C4
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:17224137..17226315

Molecular Weight (calculated)

37706.1 Da

IEP (calculated)

6.107

GRAVY (calculated)

-0.864

Length

333 amino acids

Sequence
(BLAST)

001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PSNTGLMRCS KSCRLRWTNY LRPGIKRGNF TDHEEKMIIH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLKKMQ IGGGSDDDNN DDKSNSSNNS QIKGQWERRL QTDIHMAKQA LCEALSLDKP TQIFPETKLP STSSHHHPTT TTTPNQTTSL
201: YASSTENIAR LLENWMKKSP NMTTTTTTTM ETKPFSNNNM VITTGSSSSE GTQSTITCTQ EYALDSLWSF NSERSSQSEE NTNLGESKPQ YQEPQETQVP
301: LMLLENWLFD DAAPQCNEDL MNMSLEESTE GLF

Best Arabidopsis Sequence Match ( AT3G47600.1 )
(BLAST)

001: MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMILH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF

Arabidopsis Description

MYB94Transcription factor MYB94 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN78]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.