Factsheet for Bra003793.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68173	Canola	nucleus	94.08	98.45
Bra015899.1-P	Field mustard	nucleus	82.54	83.78
AT1G74650.1	Thale cress	nucleus	79.88	81.82
Bra008160.1-P	Field mustard	nucleus	78.99	78.76
KRH63348	Soybean	nucleus	52.96	56.11
KRH56914	Soybean	nucleus	51.48	54.55
KRH54550	Soybean	nucleus	53.55	54.35
KRH03474	Soybean	nucleus	50.89	52.92
Bra035893.1-P	Field mustard	nucleus	51.78	52.24
Bra030743.1-P	Field mustard	nucleus	40.24	51.32
Bra029258.1-P	Field mustard	nucleus	50.89	50.15
PGSC0003DMT400083076	Potato	nucleus	55.62	50.13
Solyc06g069850.2.1	Tomato	nucleus	55.33	49.6
Bra025361.1-P	Field mustard	nucleus	46.45	47.15
Bra033067.1-P	Field mustard	nucleus	45.27	46.93
Bra039040.1-P	Field mustard	nucleus	46.45	46.45
Bra018598.1-P	Field mustard	nucleus	36.69	43.97
Bra010085.1-P	Field mustard	nucleus	50.59	38.17
Bra000011.1-P	Field mustard	nucleus	17.46	17.0
Bra005177.1-P	Field mustard	nucleus	17.75	16.62

Protein Annotations

EnsemblPlants:Bra003793.1	EnsemblPlants:Bra003793.1-P	EnsemblPlantsGene:Bra003793	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF922	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002541651	UniProt:M4CHW0	MapMan:15.5.2.1	:	:

Description

AT1G74650 (E=7e-124) ATY13, ATMYB31, MYB31 | MYB31 (MYB DOMAIN PROTEIN 31); DNA binding / transcription factor

Coordinates

chrA07:-:15090530..15091898

Molecular Weight (calculated)

37891.6 Da

IEP (calculated)

5.406

GRAVY (calculated)

-0.938

Length

338 amino acids

Sequence
(BLAST)

001: MGRPPCCEKM EVKKGPWTPE EDIILVSYIQ QHGPGSWRCV PRNTGLLRCS KSCRLRWTNY LRPGIKRGNF TEHEEKTIIH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLNLQR QNGNTNDDNT NMTEMSSCDN NNNNNNRRSV NKGQWEKKLQ TDINMAKQAL FQALSLDQAS SSITPDPDSP KPHDPHSTTA
201: IYASSTDNIS KLLQNWTSSS SSMPNTSSLS NNRSSSTGEG GVLDHQYSLF SPNSESGSVD ERLNIMTETS IFKGESKSNV DMEATNNATT DDHGSLSLID
301: QWLYDDQGLV DQYDDVQEDL IDVSLEGKNN GNNGQDLS

Best Arabidopsis Sequence Match ( AT1G74650.1 )
(BLAST)

001: MGRPPCCEKI EVKKGPWTPE EDIILVSYIQ QHGPGNWRSV PANTGLLRCS KSCRLRWTNY LRPGIKRGNF TQPEEKMIIH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLVMMK FQNGIINENK TNLATDISSC NNNNNGCNHN KRTTNKGQWE KKLQTDINMA KQALFQALSL DQPSSLIPPD PDSPKPHHHS
201: TTTYASSTDN ISKLLQNWTS SSSSKPNTSS VSNNRSSSPG EGGLFDHHSL FSSNSESGSV DEKLNLMSET SMFKGESKPD IDMEATPTTT TTDDQGSLSL
301: IEKWLFDDQG LVQCDDSQED LIDVSLEELK

Arabidopsis Description

ATY13At1g74650 [Source:UniProtKB/TrEMBL;Acc:Q9CA52]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.