Factsheet for Bra030743.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31125	Canola	nucleus	100.0	100.0
AT1G08810.1	Thale cress	nucleus	86.42	81.79
PGSC0003DMT400072272	Potato	nucleus	60.75	59.19
Solyc10g081490.1.1	Tomato	nucleus	59.62	58.52
Bra018598.1-P	Field mustard	nucleus	59.25	55.67
GSMUA_Achr9P17050_001	Banana	nucleus	54.72	51.97
GSMUA_Achr3P09450_001	Banana	nucleus	54.34	49.83
GSMUA_Achr10P...	Banana	nucleus	52.45	48.26
GSMUA_Achr5P07720_001	Banana	nucleus	53.21	47.8
VIT_08s0056g00800.t01	Wine grape	nucleus	56.98	47.04
Os11t0128500-01	Rice	nucleus	54.34	46.75
GSMUA_Achr10P...	Banana	nucleus	50.19	46.5
TraesCS4D01G123300.1	Wheat	nucleus	52.45	46.33
Os12t0125000-01	Rice	nucleus	54.34	46.3
HORVU4Hr1G023510.2	Barley	nucleus	52.45	46.03
TraesCS4B01G129100.1	Wheat	nucleus	52.08	45.85
Zm00001d023282_P001	Maize	nucleus	49.43	45.33
TraesCS4A01G189700.1	Wheat	nucleus	52.08	45.25
KRG94936	Soybean	nucleus	58.49	44.54
TraesCS5A01G142500.1	Wheat	nucleus	52.45	43.03
KXG22874	Sorghum	nucleus	51.7	42.95
KRH64960	Soybean	nucleus	58.11	42.78
HORVU5Hr1G045540.1	Barley	nucleus	52.08	42.2
TraesCS5D01G149600.1	Wheat	nucleus	51.7	41.9
TraesCS5B01G141200.1	Wheat	nucleus	51.7	41.9
Bra025361.1-P	Field mustard	nucleus	52.45	41.74
Bra033067.1-P	Field mustard	nucleus	51.32	41.72
Bra039040.1-P	Field mustard	nucleus	52.83	41.42
Zm00001d052397_P001	Maize	nucleus	53.21	41.35
Bra008160.1-P	Field mustard	nucleus	52.45	41.0
Bra035893.1-P	Field mustard	nucleus	51.7	40.9
Bra015899.1-P	Field mustard	nucleus	51.32	40.84
Bra003793.1-P	Field mustard	nucleus	51.32	40.24
Bra029258.1-P	Field mustard	nucleus	50.94	39.36
KXG22875	Sorghum	nucleus	47.17	39.19
HORVU5Hr1G045550.1	Barley	nucleus	52.08	38.12
OQU82780	Sorghum	nucleus	53.21	36.81
Zm00001d023284_P001	Maize	nucleus	38.49	35.79
Zm00001d023287_P001	Maize	nucleus	39.62	35.12
Bra010085.1-P	Field mustard	nucleus	50.19	29.69
Bra000011.1-P	Field mustard	nucleus	20.38	15.56
Bra005177.1-P	Field mustard	nucleus	20.75	15.24

Protein Annotations

EnsemblPlants:Bra030743.1	EnsemblPlants:Bra030743.1-P	EnsemblPlantsGene:Bra030743	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF726	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00025469A4	UniProt:M4EPM3	MapMan:15.5.2.1	:	:

Description

AT1G08810 (E=6e-109) MYB60, AtMYB60 | MYB60 (myb domain protein 60); DNA binding / transcription factor

Coordinates

chrA08:+:20538648..20539649

Molecular Weight (calculated)

30212.4 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.887

Length

265 amino acids

Sequence
(BLAST)

001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSE SEERIISENI PLQPSAARNT INHRSTYASS TENISRLLEG WMRASPKSST ANFLEQKSQN RTNDLMDHHN DQSPYEQGSW
201: DQGFHVHPKN SEENVKCDHD VQEDGDGDGD ATPPLTFIEK WLLEETNTGG QMEVMSPLME LSNML

Best Arabidopsis Sequence Match ( AT1G08810.1 )
(BLAST)

001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML

Arabidopsis Description

MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.