Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023287_P001 | Maize | nucleus | 88.77 | 84.62 |
| CDX95030 | Canola | nucleus | 27.02 | 67.54 |
| CDX93535 | Canola | nucleus | 18.95 | 65.06 |
| KXG22875 | Sorghum | nucleus | 61.75 | 55.17 |
| KRH37834 | Soybean | nucleus | 21.05 | 50.85 |
| Zm00001d023282_P001 | Maize | nucleus | 42.46 | 41.87 |
| Bra030743.1-P | Field mustard | nucleus | 35.79 | 38.49 |
| CDY31125 | Canola | nucleus | 35.79 | 38.49 |
| Solyc10g081490.1.1 | Tomato | nucleus | 36.14 | 38.15 |
| PGSC0003DMT400072272 | Potato | nucleus | 36.14 | 37.87 |
| Zm00001d052397_P001 | Maize | nucleus | 45.26 | 37.83 |
| CDY32135 | Canola | nucleus | 35.44 | 37.83 |
| GSMUA_Achr7P21670_001 | Banana | nucleus | 38.25 | 37.72 |
| Bra018598.1-P | Field mustard | nucleus | 36.84 | 37.23 |
| AT1G08810.1 | Thale cress | nucleus | 35.44 | 36.07 |
| Zm00001d053124_P001 | Maize | nucleus | 36.49 | 35.99 |
| Zm00001d032178_P001 | Maize | nucleus | 37.19 | 35.81 |
| Zm00001d032179_P001 | Maize | nucleus | 37.19 | 35.45 |
| Zm00001d020457_P001 | Maize | nucleus | 37.54 | 35.43 |
| Zm00001d047182_P001 | Maize | nucleus | 37.89 | 33.96 |
| Zm00001d022227_P002 | Maize | nucleus | 38.95 | 33.64 |
| Zm00001d005760_P001 | Maize | nucleus | 37.54 | 32.82 |
| VIT_08s0056g00800.t01 | Wine grape | nucleus | 36.84 | 32.71 |
| GSMUA_Achr10P... | Banana | nucleus | 35.79 | 32.38 |
| Zm00001d030737_P001 | Maize | nucleus | 19.3 | 14.86 |
| CDX95031 | Canola | nucleus, plastid | 7.72 | 14.19 |
Protein Annotations
| EnsemblPlants:Zm00001d023284_P001 | EnsemblPlants:Zm00001d023284_T001 | EnsemblPlantsGene:Zm00001d023284 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF909 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:AQK38844.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0008424956 | UniProt:A0A1D6IRF4 | MapMan:15.5.2.1 | : |
Description
MYB-transcription factor 123Putative MYB DNA-binding domain superfamily protein
Coordinates
chr10:+:2210289..2211146
Molecular Weight (calculated)
31464.5 Da
IEP (calculated)
10.021
GRAVY (calculated)
-0.509
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKGPWMPEE DLVLVSYIHE HGPTKWRHVP ASTGLMRCSK SCRLRWTNYL RPGIRRGNFT PREERVIVHL HSLLGNRWAA IASHLPQRTD NDIKNYWNTH
101: LKKKLVVVEE QHRAAAAAAI VAAAARGHVD DDGVTTSSSP RLLAKDDSYG YGYDARPAAA YPCSMDNVSK LVKVKAGCMK SASSSSPPAQ DGSSIRRPFF
201: SLDQTSRSTA PLPPISNVVP QLAGTVLAGQ GQGRHGGRFF HEPPQQQLSS IMENWLFLPK HQHQQQMTQS SPTPTAAAHC PCCFS
101: LKKKLVVVEE QHRAAAAAAI VAAAARGHVD DDGVTTSSSP RLLAKDDSYG YGYDARPAAA YPCSMDNVSK LVKVKAGCMK SASSSSPPAQ DGSSIRRPFF
201: SLDQTSRSTA PLPPISNVVP QLAGTVLAGQ GQGRHGGRFF HEPPQQQLSS IMENWLFLPK HQHQQQMTQS SPTPTAAAHC PCCFS
001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.