Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09957 | Sorghum | nucleus | 89.62 | 87.5 |
| Os11t0558200-01 | Rice | nucleus | 73.36 | 64.24 |
| HORVU5Hr1G123880.1 | Barley | nucleus | 54.33 | 55.67 |
| TraesCS5B01G556300.1 | Wheat | nucleus | 54.33 | 55.67 |
| TraesCS4A01G322200.1 | Wheat | nucleus | 53.98 | 55.32 |
| TraesCS5D01G552200.1 | Wheat | nucleus | 53.63 | 54.96 |
| Zm00001d023282_P001 | Maize | nucleus | 43.6 | 43.6 |
| Zm00001d020457_P001 | Maize | nucleus | 44.98 | 43.05 |
| Zm00001d005760_P001 | Maize | nucleus | 46.37 | 41.1 |
| Zm00001d032179_P001 | Maize | nucleus | 40.48 | 39.13 |
| Zm00001d052397_P001 | Maize | nucleus | 44.64 | 37.83 |
| Zm00001d022227_P002 | Maize | nucleus | 42.91 | 37.58 |
| Zm00001d032178_P001 | Maize | nucleus | 38.41 | 37.5 |
| Zm00001d023284_P001 | Maize | nucleus | 35.99 | 36.49 |
| Zm00001d023287_P001 | Maize | nucleus | 37.37 | 36.12 |
| Zm00001d047182_P001 | Maize | nucleus | 39.45 | 35.85 |
| Zm00001d030737_P001 | Maize | nucleus | 20.07 | 15.68 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100384664 | MapMan:15.5.2.1 | ProteinID:AQK58795.1 | EMBL:BT083881 | UniProt:C4IZ84 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| EMBL:KJ727611 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF726 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000182BD84 | EnsemblPlantsGene:Zm00001d053124 | EnsemblPlants:Zm00001d053124_P001 |
| EnsemblPlants:Zm00001d053124_T001 | SEG:seg | : | : | : | : |
Description
MYB-transcription factor 61myb domain protein 60
Coordinates
chr4:-:214607218..214608953
Molecular Weight (calculated)
31435.4 Da
IEP (calculated)
7.090
GRAVY (calculated)
-0.334
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCDNG VGVKKGPWTP EEDIVLVSYI QQHGPGNWRS VPENTGLMRC SKSCRLRWTN YLRPGIKRGN FTPHEEGIII HLQALLGNKW AAIASYLPQR
101: TDNDIKNYWN THLKKKVKRL QQPAADSFQT TASNAVTCSP NYYSPSSSHH SLQGMQPMSS YPHTTCSGGA PSNNEAMTDT TTGVVSNLFQ AWMRPSPAAA
201: TANCKIAMQE FQEEQGAAAA ASIVCKEQMV TCGDVNRPPA LEMVVAPVMG ASTATFSLLE DWLLDDMPGQ AMDGFMGISA GCCADPIMF
101: TDNDIKNYWN THLKKKVKRL QQPAADSFQT TASNAVTCSP NYYSPSSSHH SLQGMQPMSS YPHTTCSGGA PSNNEAMTDT TTGVVSNLFQ AWMRPSPAAA
201: TANCKIAMQE FQEEQGAAAA ASIVCKEQMV TCGDVNRPPA LEMVVAPVMG ASTATFSLLE DWLLDDMPGQ AMDGFMGISA GCCADPIMF
001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.