Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023284_P001 | Maize | nucleus | 84.62 | 88.77 |
| CDX95030 | Canola | nucleus | 26.76 | 70.18 |
| CDX93535 | Canola | nucleus | 19.4 | 69.88 |
| KXG22875 | Sorghum | nucleus | 59.87 | 56.11 |
| KRH37834 | Soybean | nucleus | 20.4 | 51.69 |
| Zm00001d023282_P001 | Maize | nucleus | 41.81 | 43.25 |
| Bra030743.1-P | Field mustard | nucleus | 35.12 | 39.62 |
| CDY31125 | Canola | nucleus | 35.12 | 39.62 |
| Solyc10g081490.1.1 | Tomato | nucleus | 35.45 | 39.26 |
| PGSC0003DMT400072272 | Potato | nucleus | 35.45 | 38.97 |
| CDY32135 | Canola | nucleus | 34.45 | 38.58 |
| Zm00001d052397_P001 | Maize | nucleus | 43.81 | 38.42 |
| Bra018598.1-P | Field mustard | nucleus | 35.79 | 37.94 |
| GSMUA_Achr7P21670_001 | Banana | nucleus | 36.45 | 37.72 |
| Zm00001d053124_P001 | Maize | nucleus | 36.12 | 37.37 |
| AT1G08810.1 | Thale cress | nucleus | 34.78 | 37.14 |
| Zm00001d020457_P001 | Maize | nucleus | 37.12 | 36.76 |
| Zm00001d032178_P001 | Maize | nucleus | 36.12 | 36.49 |
| Zm00001d022227_P002 | Maize | nucleus | 39.46 | 35.76 |
| Zm00001d047182_P001 | Maize | nucleus | 37.79 | 35.53 |
| Zm00001d032179_P001 | Maize | nucleus | 35.45 | 35.45 |
| VIT_08s0056g00800.t01 | Wine grape | nucleus | 36.45 | 33.96 |
| Zm00001d005760_P001 | Maize | nucleus | 36.79 | 33.74 |
| GSMUA_Achr10P... | Banana | nucleus | 33.78 | 32.06 |
| Zm00001d030737_P001 | Maize | nucleus | 18.06 | 14.59 |
| CDX95031 | Canola | nucleus, plastid | 7.02 | 13.55 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103640681 | MapMan:15.5.2.1 | UniProt:A0A1D6IRF7 | ProteinID:AQK38847.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF909 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0004DEC1A1 | EnsemblPlantsGene:Zm00001d023287 | EnsemblPlants:Zm00001d023287_P001 | EnsemblPlants:Zm00001d023287_T001 | SEG:seg |
Description
MYB-transcription factor 107Putative MYB DNA-binding domain superfamily protein
Coordinates
chr10:+:2216330..2217229
Molecular Weight (calculated)
33210.6 Da
IEP (calculated)
9.996
GRAVY (calculated)
-0.585
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MESRPPMPWC ACDRAGTTTT MTTAIKKGPW MPEEDLVLVS YIHEHGPSKW RHVAASTGLM RCSKSCRLRW TNYLRPGIRR GHFTAREERV IVHLHSLLGN
101: RWAAIASHLP QRTDNDIKNY WNTHLKKKKV VVEEQQRAAA AAAKRHVDDG GITTSRSPRL LAKDDSYGYD YDARPAAAYP CTMDNVSKPL KVKLGCMKSA
201: SSSSPPAQDG SSSIRRPFFS LDQTSGSTAP LPPISNVVPQ PVLAGQGRHG GRFFHEPPQQ QLSSIMENWL FLPKQQHQQQ MTASSPTPTA AAHCPCCFS
101: RWAAIASHLP QRTDNDIKNY WNTHLKKKKV VVEEQQRAAA AAAKRHVDDG GITTSRSPRL LAKDDSYGYD YDARPAAAYP CTMDNVSKPL KVKLGCMKSA
201: SSSSPPAQDG SSSIRRPFFS LDQTSGSTAP LPPISNVVPQ PVLAGQGRHG GRFFHEPPQQ QLSSIMENWL FLPKQQHQQQ MTASSPTPTA AAHCPCCFS
001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.