Factsheet for Zm00001d020457_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35628	Sorghum	nucleus	92.38	85.06
Zm00001d005760_P001	Maize	nucleus	91.72	84.97
GSMUA_Achr8P16920_001	Banana	nucleus	30.79	82.3
TraesCS5D01G234800.1	Wheat	nucleus	84.11	79.87
TraesCS5B01G226100.1	Wheat	nucleus	83.77	79.81
TraesCS5A01G227400.1	Wheat	nucleus	83.77	79.56
Zm00001d032179_P001	Maize	nucleus	55.96	56.52
GSMUA_Achr7P21010_001	Banana	nucleus	49.01	55.02
GSMUA_Achr4P00480_001	Banana	nucleus	48.01	54.72
GSMUA_Achr6P02690_001	Banana	nucleus	44.7	54.0
GSMUA_Achr6P10700_001	Banana	nucleus	45.7	53.91
GSMUA_Achr8P01400_001	Banana	nucleus	46.69	53.61
Zm00001d032178_P001	Maize	nucleus	52.32	53.38
GSMUA_Achr2P22010_001	Banana	nucleus	44.7	53.36
GSMUA_Achr7P18080_001	Banana	nucleus	45.7	51.11
Zm00001d022227_P002	Maize	nucleus	52.65	48.18
Zm00001d047182_P001	Maize	nucleus	48.34	45.91
Zm00001d023282_P001	Maize	nucleus	43.71	45.67
Zm00001d053124_P001	Maize	nucleus	43.05	44.98
Zm00001d052397_P001	Maize	nucleus	44.04	39.0
Zm00001d023284_P001	Maize	nucleus	35.43	37.54
Zm00001d023287_P001	Maize	nucleus	36.76	37.12
Zm00001d030737_P001	Maize	nucleus	23.51	19.19

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:103632739	MapMan:15.5.2.1	UniProt:A0A096QJ49	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	ProteinID:ONM54962.1
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF682	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00005B0D6D	EnsemblPlantsGene:Zm00001d020457	EnsemblPlants:Zm00001d020457_P001	EnsemblPlants:Zm00001d020457_T001	SEG:seg

Description

MYB-transcription factor 162Transcription factor MYB30

Coordinates

chr7:+:115739490..115741009

Molecular Weight (calculated)

32333.3 Da

IEP (calculated)

9.072

GRAVY (calculated)

-0.556

Length

302 amino acids

Sequence
(BLAST)

001: MGRPPCCDKM GVKKGPWTPE EDLMLVSYVQ EHGPGNWRAV PTNTGLMRCS KSCRLRWTNY LRPGIKRGNF TEQEEKLIVH LQALLGNRWA AIASYLPKRT
101: DNDIKNYWNT HLKKKLKNMQ GGEGGAGGKR PAVPKGQWER RLQTDIHTAR QALRDALSLE PSATPLAKVE PLPTAPGCAT YASSADNIAR LLEGWLRPGS
201: GKGPEASGST STTATTRQRP QCSGEGTASA SASHSGGAAA NTAAQTPECS TETSKMAGSS VGAGSAPAFS MLERWLLDDG MGHAEVGLMT DVVPLGDPSE
301: FF

Best Arabidopsis Sequence Match ( AT3G28910.1 )
(BLAST)

001: MVRPPCCDKG GVKKGPWTPE EDIILVTYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMIVH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLNKVN QDSHQELDRS SLSSSPSSSS ANSNSNISRG QWERRLQTDI HLAKKALSEA LSPAVAPIIT STVTTTSSSA ESRRSTSSAS
201: GFLRTQETST TYASSTENIA KLLKGWVKNS PKTQNSADQI ASTEVKEVIK SDDGKECAGA FQSFSEFDHS YQQAGVSPDH ETKPDITGCC SNQSQWSLFE
301: KWLFEDSGGQ IGDILLDENT NFF

Arabidopsis Description

MYB30Transcription factor MYB30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.