Factsheet for TraesCS5D01G234800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G226100.1	Wheat	nucleus	98.74	99.05
TraesCS5A01G227400.1	Wheat	nucleus	98.74	98.74
GSMUA_Achr8P16920_001	Banana	nucleus	30.19	84.96
Zm00001d020457_P001	Maize	nucleus	79.87	84.11
KXG35628	Sorghum	nucleus	84.59	82.01
Zm00001d005760_P001	Maize	nucleus	83.33	81.29
Os08t0437300-00	Rice	nucleus	56.6	68.7
GSMUA_Achr7P21010_001	Banana	nucleus	48.74	57.62
GSMUA_Achr4P00480_001	Banana	nucleus	47.8	57.36
GSMUA_Achr6P10700_001	Banana	nucleus	45.28	56.25
GSMUA_Achr8P01400_001	Banana	nucleus	45.6	55.13
GSMUA_Achr2P22010_001	Banana	nucleus	43.71	54.94
GSMUA_Achr6P02690_001	Banana	nucleus	42.45	54.0
GSMUA_Achr7P18080_001	Banana	nucleus	45.28	53.33
TraesCS2D01G163700.1	Wheat	nucleus	50.63	51.44
Os07t0484700-01	Rice	nucleus	25.16	47.9
TraesCS4D01G123300.1	Wheat	nucleus	44.03	46.67
TraesCS5D01G552200.1	Wheat	nucleus	41.2	46.45
TraesCS5D01G149600.1	Wheat	nucleus	44.65	43.43
TraesCS5D01G093100.1	Wheat	mitochondrion, nucleus	22.64	19.94

Protein Annotations

EnsemblPlants:TraesCS5D01G234800.1	EnsemblPlantsGene:TraesCS5D01G234800	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF682	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:342711945..342713137

Molecular Weight (calculated)

33297.0 Da

IEP (calculated)

7.503

GRAVY (calculated)

-0.524

Length

318 amino acids

Sequence
(BLAST)

001: MGRPPCCDKV GVKKGPWTPE EDLMLVSYIQ EHGPGNWRAV PTNTGLMRCS KSCRLRWTNY LRPGIKRGNF TDQEEKLIVH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMQ DAGGNDGGSE GAGAGGVGGG VTKAAAPKGQ WERRLQTDIH TARQALRDAL SLEPSQPAAL AAPALPTPSP GSVTTYASSA
201: DNIARLLEGW MRPGSSSKGP EASGSTSSTT ATTRQQPQCS WDGAASASAS HSGGAAGAAA AQTPEGSTET SKLAGAGAGG APPAFSMLEN WLLDDGMGHG
301: EAGLMDDVVP LGDPSEFF

Best Arabidopsis Sequence Match ( AT3G47600.1 )
(BLAST)

001: MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMILH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF

Arabidopsis Description

MYB94Transcription factor MYB94 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN78]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.