Factsheet for Os07t0484700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P16920_001	Banana	nucleus	44.31	65.49
Os07t0629000-01	Rice	nucleus	44.91	49.34
GSMUA_Achr6P02690_001	Banana	nucleus	45.51	30.4
Os08t0437300-00	Rice	nucleus	46.71	29.77
GSMUA_Achr8P01400_001	Banana	nucleus	46.71	29.66
GSMUA_Achr2P22010_001	Banana	nucleus	44.91	29.64
GSMUA_Achr6P10700_001	Banana	nucleus	44.91	29.3
GSMUA_Achr7P21010_001	Banana	nucleus	46.71	29.0
GSMUA_Achr4P00480_001	Banana	nucleus	45.51	28.68
GSMUA_Achr7P18080_001	Banana	nucleus	45.51	28.15
TraesCS5D01G234800.1	Wheat	nucleus	47.9	25.16
Zm00001d032179_P001	Maize	nucleus	44.91	25.08
EES13898	Sorghum	nucleus	45.51	25.0
TraesCS5B01G226100.1	Wheat	nucleus	47.31	24.92
TraesCS5A01G227400.1	Wheat	nucleus	47.31	24.84
Zm00001d032178_P001	Maize	nucleus	41.92	23.65
EES13899	Sorghum	nucleus	42.52	23.2
Os11t0128500-01	Rice	nucleus	41.92	22.73
Os12t0125000-01	Rice	nucleus	41.92	22.51
Os11t0558200-01	Rice	nucleus	41.32	20.91
Os12t0572000-01	Rice	nucleus	21.56	10.53

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4343245	EMBL:AK066025	ProteinID:BAF21566.1	ProteinID:BAT01510.1
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os07g0484700
EnsemblPlants:Os07t0484700-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF682	UniProt:Q0D6F7
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0000E12B0E	RefSeq:XP_015647825.1	RefSeq:XP_015647826.1
RefSeq:XP_015647827.1	RefSeq:XP_015647828.1	RefSeq:XP_015647829.1	RefSeq:XP_015647830.1	RefSeq:XP_015647831.1	RefSeq:XP_015647832.1
RefSeq:XP_015647833.1	RefSeq:XP_015647834.1	RefSeq:XP_015647835.1	RefSeq:XP_015647836.1	RefSeq:XP_015647837.1	RefSeq:XP_015647838.1
RefSeq:XP_015647840.1	SEG:seg	:	:	:	:

Description

Myb transcription factor domain containing protein. (Os07t0484700-01)

Coordinates

chr7:+:17777576..17780338

Molecular Weight (calculated)

18224.5 Da

IEP (calculated)

10.687

GRAVY (calculated)

-0.663

Length

167 amino acids

Sequence
(BLAST)

001: MPDQRRGTTA LLPTARHGPA ASDRHHSASA ARRDAAATRP ATSVAAANTL VSSSLIEIES THTPPTTGRP PRTGEQDGEA AVLRQGWVKK GPWTPEEDLM
101: LASYIQEHGS GNWRAVPTNT GVMRCSKSCR LRWTNYLRPG IKRGNFTEQE EKLIVHLQAL LGNRSLP

Best Arabidopsis Sequence Match ( AT3G28910.1 )
(BLAST)

001: MVRPPCCDKG GVKKGPWTPE EDIILVTYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMIVH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLNKVN QDSHQELDRS SLSSSPSSSS ANSNSNISRG QWERRLQTDI HLAKKALSEA LSPAVAPIIT STVTTTSSSA ESRRSTSSAS
201: GFLRTQETST TYASSTENIA KLLKGWVKNS PKTQNSADQI ASTEVKEVIK SDDGKECAGA FQSFSEFDHS YQQAGVSPDH ETKPDITGCC SNQSQWSLFE
301: KWLFEDSGGQ IGDILLDENT NFF

Arabidopsis Description

MYB30Transcription factor MYB30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.