Factsheet for Os11t0128500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0125000-01	Rice	nucleus	96.1	95.18
CDX93535	Canola	nucleus	24.35	90.36
CDX95030	Canola	nucleus	31.49	85.09
Os07t0629000-01	Rice	nucleus	35.39	71.71
TraesCS4B01G129100.1	Wheat	nucleus	64.61	66.11
TraesCS4D01G123300.1	Wheat	nucleus	64.29	66.0
TraesCS4A01G189700.1	Wheat	nucleus	64.61	65.25
HORVU4Hr1G023510.2	Barley	nucleus	63.96	65.23
KRH37834	Soybean	nucleus	22.08	57.63
Solyc10g081490.1.1	Tomato	nucleus	48.05	54.81
PGSC0003DMT400072272	Potato	nucleus	48.05	54.41
CDY31125	Canola	nucleus	46.75	54.34
Bra030743.1-P	Field mustard	nucleus	46.75	54.34
CDY32135	Canola	nucleus	46.1	53.18
AT1G08810.1	Thale cress	nucleus	47.08	51.79
Zm00001d052397_P001	Maize	nucleus	54.22	48.97
TraesCS5D01G149600.1	Wheat	nucleus	51.95	48.93
TraesCS5A01G142500.1	Wheat	nucleus	51.3	48.92
HORVU5Hr1G045540.1	Barley	nucleus	51.3	48.32
TraesCS5B01G141200.1	Wheat	nucleus	51.3	48.32
Bra018598.1-P	Field mustard	nucleus	43.18	47.16
GSMUA_Achr7P21670_001	Banana	nucleus	43.18	46.02
Os08t0437300-00	Rice	nucleus	38.96	45.8
VIT_08s0056g00800.t01	Wine grape	nucleus	47.73	45.79
HORVU5Hr1G045550.1	Barley	nucleus	51.3	43.65
OQU82780	Sorghum	nucleus	54.22	43.6
Os07t0484700-01	Rice	nucleus	22.73	41.92
Os11t0558200-01	Rice	nucleus	43.51	40.61
GSMUA_Achr10P...	Banana	nucleus	40.58	39.68
CDX95031	Canola	nucleus, plastid	9.09	18.06
Os12t0572000-01	Rice	nucleus	17.53	15.79

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4349657	ProteinID:ABA91289.1	EMBL:AK241549	ProteinID:BAF27481.1
ProteinID:BAT12496.1	ProteinID:EAZ17275.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os11g0128500	EnsemblPlants:Os11t0128500-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF909	UniProt:Q2RB26	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000068255A
RefSeq:XP_015616542.1	SEG:seg	:	:	:	:

Description

Similar to Myb factor. (Os11t0128500-01)

Coordinates

chr11:-:1317256..1318705

Molecular Weight (calculated)

33601.5 Da

IEP (calculated)

5.838

GRAVY (calculated)

-0.414

Length

308 amino acids

Sequence
(BLAST)

001: MGRPPCCDKE GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PINTGLMRCS KSCRLRWTNY LRPGIKRGNF TAHEEGIIVH LQSLLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKLAAAA NSTSAASNRH PIFADATFPS AAGSHTVSSN SDVNQMAAIA RRSPFADCPS SSYASSMDNI SKLLDGFMKT NSPSPPPPPL
201: QHYDGGYYDD VKPAVDVVGN PLLSSFDCMS GADLDCCFDV HQQQPASSFM EYGGYGGGYG DESKQQLMNQ AAAPLSSIEK WLFDEAAAEQ VADLMDLSDG
301: CCSVPMMF

Best Arabidopsis Sequence Match ( AT1G08810.1 )
(BLAST)

001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML

Arabidopsis Description

MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.