Factsheet for GSMUA_Achr10P01640_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93535	Canola	nucleus	25.17	86.75
GSMUA_Achr10P...	Banana	nucleus	85.31	84.72
CDX95030	Canola	nucleus	32.87	82.46
GSMUA_Achr8P16920_001	Banana	nucleus	28.67	72.57
GSMUA_Achr2P22010_001	Banana	nucleus	46.85	52.96
GSMUA_Achr7P21010_001	Banana	nucleus	48.95	52.04
GSMUA_Achr6P10700_001	Banana	nucleus	46.15	51.56
GSMUA_Achr3P09450_001	Banana	nucleus	52.1	51.56
GSMUA_Achr4P00480_001	Banana	nucleus	47.55	51.32
GSMUA_Achr8P01400_001	Banana	nucleus	46.85	50.95
Solyc10g081490.1.1	Tomato	nucleus	47.9	50.74
GSMUA_Achr9P17050_001	Banana	nucleus	49.3	50.54
PGSC0003DMT400072272	Potato	nucleus	47.9	50.37
CDY31125	Canola	nucleus	46.5	50.19
Bra030743.1-P	Field mustard	nucleus	46.5	50.19
CDY32135	Canola	nucleus	46.15	49.44
Bra018598.1-P	Field mustard	nucleus	47.55	48.23
GSMUA_Achr7P21670_001	Banana	nucleus	48.6	48.1
GSMUA_Achr6P02690_001	Banana	nucleus	41.96	48.0
AT1G08810.1	Thale cress	nucleus	46.85	47.86
GSMUA_Achr7P18080_001	Banana	nucleus	45.1	47.78
GSMUA_Achr5P07720_001	Banana	nucleus	48.95	47.46
GSMUA_Achr11P...	Banana	nucleus	39.16	44.62
GSMUA_AchrUn_...	Banana	nucleus	44.41	44.1
VIT_08s0056g00800.t01	Wine grape	nucleus	48.95	43.61
KRG94936	Soybean	nucleus	52.45	43.1
KRH64960	Soybean	nucleus	52.1	41.39
GSMUA_Achr10P...	Banana	nucleus	44.76	40.63
CDX95031	Canola	nucleus, plastid	11.19	20.65
GSMUA_Achr7P10550_001	Banana	nucleus	21.33	19.93
GSMUA_Achr9P03320_001	Banana	nucleus	18.18	18.84
GSMUA_Achr9P28330_001	Banana	nucleus	20.98	18.63
GSMUA_Achr9P19380_001	Banana	nucleus	19.93	18.57
GSMUA_Achr5P29070_001	Banana	nucleus	21.33	10.37

Protein Annotations

EnsemblPlants:GSMUA_Achr10P01640_001	EnsemblPlants:GSMUA_Achr10T01640_001	EnsemblPlantsGene:GSMUA_Achr10G01640_001	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF726	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002968720	UniProt:M0REJ1	MapMan:15.5.2.1	:	:

Description

myb-like DNA-binding domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G01640_001]

Coordinates

chr10:+:3884919..3886601

Molecular Weight (calculated)

32269.7 Da

IEP (calculated)

5.923

GRAVY (calculated)

-0.677

Length

286 amino acids

Sequence
(BLAST)

001: MGRPPFCDNI GIKKGPWTPE EDIVLVSYIQ EHGPGNWRSV PTSTGLMRCS KSCRLRWTNY LRPGIKRGNF TPYEERVIIR LQSLLGNRWA SIASHLPRRT
101: DNDIKNYWNT HLKKKINKIQ GAADADGKKP SSDARPVCHD YNSRYASSSE NISRLLQGWM QSSPTVDAPG KLKQSFFTAD DDDDETSNII SALAAASLTE
201: KSQAESDRRC GATKTHDDFV LLHSFENMDI VPWENTGEET RPFQHARADD AEAQLGAESE QPPLFLSENW LLDEALVQEL TMSFLL

Best Arabidopsis Sequence Match ( AT1G08810.1 )
(BLAST)

001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML

Arabidopsis Description

MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.