Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P16920_001 | Banana | nucleus | 33.07 | 73.45 |
| GSMUA_Achr6P10700_001 | Banana | nucleus | 49.0 | 48.05 |
| GSMUA_Achr4P00480_001 | Banana | nucleus | 50.6 | 47.92 |
| GSMUA_Achr8P01400_001 | Banana | nucleus | 49.8 | 47.53 |
| GSMUA_Achr7P21010_001 | Banana | nucleus | 50.6 | 47.21 |
| GSMUA_Achr2P22010_001 | Banana | nucleus | 47.01 | 46.64 |
| GSMUA_Achr7P18080_001 | Banana | nucleus | 49.0 | 45.56 |
| GSMUA_Achr6P02690_001 | Banana | nucleus | 43.82 | 44.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.0 | 42.71 |
| GSMUA_Achr3P09450_001 | Banana | nucleus | 47.41 | 41.18 |
| GSMUA_Achr5P07720_001 | Banana | nucleus | 47.81 | 40.68 |
| GSMUA_Achr10P... | Banana | nucleus | 45.42 | 39.58 |
| GSMUA_Achr10P... | Banana | nucleus | 44.62 | 39.16 |
| GSMUA_Achr9P17050_001 | Banana | nucleus | 43.43 | 39.07 |
| GSMUA_Achr7P21670_001 | Banana | nucleus | 42.63 | 37.02 |
| GSMUA_Achr10P... | Banana | nucleus | 44.22 | 35.24 |
| GSMUA_Achr7P10550_001 | Banana | nucleus | 24.3 | 19.93 |
| GSMUA_Achr9P03320_001 | Banana | nucleus | 21.91 | 19.93 |
| GSMUA_Achr9P19380_001 | Banana | nucleus | 23.11 | 18.89 |
| GSMUA_Achr9P28330_001 | Banana | nucleus | 23.9 | 18.63 |
| GSMUA_Achr5P29070_001 | Banana | nucleus | 25.9 | 11.05 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P13080_001 | EnsemblPlants:GSMUA_Achr11T13080_001 | EnsemblPlantsGene:GSMUA_Achr11G13080_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF902 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000296EC57 | UniProt:M0RRT8 | MapMan:15.5.2.1 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G13080_001]
Coordinates
chr11:-:12858603..12862095
Molecular Weight (calculated)
27857.3 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.845
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRPLGSETV GVKKGPWTPE EDLILFSYIK EHGPGKWNDV PVKTGLMRCS KSCRLRWTNY LRPGIKRGNF TDQEDRMIVH LQALLGNRWA AIASYLPERT
101: DNDIKNHWNA HLKKKLRKLD ADADVSKSGS KKHSNEQSIS RGQWERCLQT DIHKAKRDFS STPCASSTDD MAGLLQGWTT DDSPKPGDSS SSHRFADSMS
201: EAAPGSVAVE GKQPLFPNFE AHFAEPIEGE EEEEISAESV GSANDEGRGS T
101: DNDIKNHWNA HLKKKLRKLD ADADVSKSGS KKHSNEQSIS RGQWERCLQT DIHKAKRDFS STPCASSTDD MAGLLQGWTT DDSPKPGDSS SSHRFADSMS
201: EAAPGSVAVE GKQPLFPNFE AHFAEPIEGE EEEEISAESV GSANDEGRGS T
001: MGRPPCCEKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKTIVH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKIN ESGEEDNDGV SSSNTSSQKN HQSTNKGQWE RRLQTDINMA KQALCEALSL DKPSSTLSSS SSLPTPVITQ QNIRNFSSAL
201: LDRCYDPSSS SSSTTTTTTS NTTNPYPSGV YASSAENIAR LLQDFMKDTP KALTLSSSSP VSETGPLTAA VSEEGGEGFE QSFFSFNSMD ETQNLTQETS
301: FFHDQVIKPE ITMDQDHGLI SQGSLSLFEK WLFDEQSHEM VGMALAGQEG MF
101: DNDIKNYWNT HLKKKLKKIN ESGEEDNDGV SSSNTSSQKN HQSTNKGQWE RRLQTDINMA KQALCEALSL DKPSSTLSSS SSLPTPVITQ QNIRNFSSAL
201: LDRCYDPSSS SSSTTTTTTS NTTNPYPSGV YASSAENIAR LLQDFMKDTP KALTLSSSSP VSETGPLTAA VSEEGGEGFE QSFFSFNSMD ETQNLTQETS
301: FFHDQVIKPE ITMDQDHGLI SQGSLSLFEK WLFDEQSHEM VGMALAGQEG MF
Arabidopsis Description
MYB96Transcription factor MYB96 [Source:UniProtKB/Swiss-Prot;Acc:Q24JK1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.