Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93535 | Canola | nucleus | 25.76 | 91.57 |
| CDX95030 | Canola | nucleus | 33.22 | 85.96 |
| GSMUA_Achr8P16920_001 | Banana | nucleus | 29.49 | 76.99 |
| GSMUA_Achr2P22010_001 | Banana | nucleus | 49.49 | 57.71 |
| GSMUA_Achr3P09450_001 | Banana | nucleus | 54.24 | 55.36 |
| GSMUA_Achr8P01400_001 | Banana | nucleus | 49.15 | 55.13 |
| GSMUA_Achr6P10700_001 | Banana | nucleus | 47.8 | 55.08 |
| GSMUA_Achr9P17050_001 | Banana | nucleus | 51.53 | 54.48 |
| Solyc10g081490.1.1 | Tomato | nucleus | 49.49 | 54.07 |
| PGSC0003DMT400072272 | Potato | nucleus | 49.49 | 53.68 |
| Bra030743.1-P | Field mustard | nucleus | 47.8 | 53.21 |
| CDY31125 | Canola | nucleus | 47.8 | 53.21 |
| GSMUA_Achr7P21010_001 | Banana | nucleus | 48.14 | 52.79 |
| CDY32135 | Canola | nucleus | 47.46 | 52.43 |
| GSMUA_Achr6P02690_001 | Banana | nucleus | 44.41 | 52.4 |
| GSMUA_Achr10P... | Banana | nucleus | 50.17 | 51.39 |
| AT1G08810.1 | Thale cress | nucleus | 48.14 | 50.71 |
| GSMUA_Achr4P00480_001 | Banana | nucleus | 45.42 | 50.57 |
| GSMUA_Achr7P18080_001 | Banana | nucleus | 46.1 | 50.37 |
| GSMUA_Achr10P... | Banana | nucleus | 47.46 | 48.95 |
| Bra018598.1-P | Field mustard | nucleus | 46.78 | 48.94 |
| GSMUA_Achr11P... | Banana | nucleus | 40.68 | 47.81 |
| GSMUA_Achr7P21670_001 | Banana | nucleus | 46.44 | 47.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.1 | 47.22 |
| VIT_08s0056g00800.t01 | Wine grape | nucleus | 49.83 | 45.79 |
| KRG94936 | Soybean | nucleus | 52.54 | 44.54 |
| GSMUA_Achr10P... | Banana | nucleus | 46.1 | 43.17 |
| KRH64960 | Soybean | nucleus | 52.54 | 43.06 |
| GSMUA_Achr9P03320_001 | Banana | nucleus | 20.34 | 21.74 |
| CDX95031 | Canola | nucleus, plastid | 11.19 | 21.29 |
| GSMUA_Achr7P10550_001 | Banana | nucleus | 21.69 | 20.91 |
| GSMUA_Achr9P28330_001 | Banana | nucleus | 22.37 | 20.5 |
| GSMUA_Achr9P19380_001 | Banana | nucleus | 20.68 | 19.87 |
| GSMUA_Achr5P29070_001 | Banana | nucleus | 22.37 | 11.22 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P07720_001 | EnsemblPlants:GSMUA_Achr5T07720_001 | EnsemblPlantsGene:GSMUA_Achr5G07720_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF726 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002962AF9 | UniProt:M0SWK1 | MapMan:15.5.2.1 | : | : |
Description
Putative Myb-related protein 306 [Source:GMGC_GENE;Acc:GSMUA_Achr5G07720_001]
Coordinates
chr5:-:5537475..5540100
Molecular Weight (calculated)
32849.8 Da
IEP (calculated)
8.156
GRAVY (calculated)
-0.593
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCDRV GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLMRCS KSCRLRWINY LRPGIKHGNF TPHEEGIIIH LQALLGNRWA AIASYLPQRT
101: DNDIKNYWNT HLKKKMIDTA GSYVISPDTS PVCHDYMSKG CNTEAVKQEM KFPLSRFSQT PSIYASSTEN ISRLLEGWVR SSPKAAAKKK EFAITDNNNS
201: SSSNLDSLLS FENTSGMISW GKIHGPQLAQ ANAEAKQDAE NSQPPLSSLE KWLFDEALGQ TDGFLELPAN CLSCFHCKKE TGGSFTPHPP TPPQQ
101: DNDIKNYWNT HLKKKMIDTA GSYVISPDTS PVCHDYMSKG CNTEAVKQEM KFPLSRFSQT PSIYASSTEN ISRLLEGWVR SSPKAAAKKK EFAITDNNNS
201: SSSNLDSLLS FENTSGMISW GKIHGPQLAQ ANAEAKQDAE NSQPPLSSLE KWLFDEALGQ TDGFLELPAN CLSCFHCKKE TGGSFTPHPP TPPQQ
001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.