Factsheet for GSMUA_Achr9P17050_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93535	Canola	nucleus	27.6	92.77
CDX95030	Canola	nucleus	35.84	87.72
GSMUA_Achr8P16920_001	Banana	nucleus	29.75	73.45
Solyc10g081490.1.1	Tomato	nucleus	55.91	57.78
GSMUA_Achr3P09450_001	Banana	nucleus	58.78	56.75
PGSC0003DMT400072272	Potato	nucleus	55.2	56.62
Bra030743.1-P	Field mustard	nucleus	51.97	54.72
CDY31125	Canola	nucleus	51.97	54.72
CDY32135	Canola	nucleus	51.61	53.93
GSMUA_Achr2P22010_001	Banana	nucleus	48.75	53.75
GSMUA_Achr6P10700_001	Banana	nucleus	49.1	53.52
AT1G08810.1	Thale cress	nucleus	53.05	52.86
GSMUA_Achr7P21010_001	Banana	nucleus	50.18	52.04
GSMUA_Achr5P07720_001	Banana	nucleus	54.48	51.53
GSMUA_Achr7P18080_001	Banana	nucleus	49.1	50.74
GSMUA_Achr10P...	Banana	nucleus	52.33	50.69
GSMUA_Achr8P01400_001	Banana	nucleus	47.67	50.57
Bra018598.1-P	Field mustard	nucleus	50.54	50.0
GSMUA_Achr10P...	Banana	nucleus	50.54	49.3
GSMUA_Achr6P02690_001	Banana	nucleus	43.73	48.8
GSMUA_Achr7P21670_001	Banana	nucleus	50.18	48.44
VIT_08s0056g00800.t01	Wine grape	nucleus	55.2	47.98
GSMUA_Achr4P00480_001	Banana	nucleus	44.8	47.17
GSMUA_AchrUn_...	Banana	nucleus	46.59	45.14
KRG94936	Soybean	nucleus	56.27	45.11
KRH64960	Soybean	nucleus	56.27	43.61
GSMUA_Achr10P...	Banana	nucleus	49.1	43.49
GSMUA_Achr11P...	Banana	nucleus	39.07	43.43
CDX95031	Canola	nucleus, plastid	11.47	20.65
GSMUA_Achr9P03320_001	Banana	nucleus	19.35	19.57
GSMUA_Achr7P10550_001	Banana	nucleus	21.15	19.28
GSMUA_Achr9P19380_001	Banana	nucleus	20.79	18.89
GSMUA_Achr9P28330_001	Banana	nucleus	20.79	18.01
GSMUA_Achr5P29070_001	Banana	nucleus	21.51	10.2

Protein Annotations

EnsemblPlants:GSMUA_Achr9P17050_001	EnsemblPlants:GSMUA_Achr9T17050_001	EnsemblPlantsGene:GSMUA_Achr9G17050_001	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF726	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002958E4F	UniProt:M0U112	MapMan:15.5.2.1	:	:

Description

Myb-related protein 306 [Source:GMGC_GENE;Acc:GSMUA_Achr9G17050_001]

Coordinates

chr9:-:11583211..11584837

Molecular Weight (calculated)

30835.6 Da

IEP (calculated)

8.396

GRAVY (calculated)

-0.572

Length

279 amino acids

Sequence
(BLAST)

001: MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PSNTGLMRCS KSCRLRWTNY LRPGIKRGNF TPHEEGIIIH LQSLLGNKWA AIASYLPQRT
101: DNDIKNYWNT HLKKKIKKKQ DITVLTFPLP SMRLTPPIYA CSTGNISRLL EGWTRSSKKN TQGKLQERAI ADDSHSSNND ATAAASVREK SRAAGDQGCS
201: TAMTHEDLGT LLSFEKVSGG SWEKTAAGKA SFGDAEATQG GENHQPPLSL LEKWLFDEAS GQVDELMDLP VDCCSLSMF

Best Arabidopsis Sequence Match ( AT1G08810.1 )
(BLAST)

001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML

Arabidopsis Description

MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.