Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93535 | Canola | nucleus | 25.69 | 89.16 |
| CDX95030 | Canola | nucleus | 34.03 | 85.96 |
| GSMUA_Achr10P... | Banana | nucleus | 84.72 | 85.31 |
| GSMUA_Achr8P16920_001 | Banana | nucleus | 28.82 | 73.45 |
| GSMUA_Achr2P22010_001 | Banana | nucleus | 48.26 | 54.94 |
| GSMUA_Achr7P21010_001 | Banana | nucleus | 50.69 | 54.28 |
| GSMUA_Achr3P09450_001 | Banana | nucleus | 53.47 | 53.29 |
| GSMUA_Achr4P00480_001 | Banana | nucleus | 48.96 | 53.21 |
| GSMUA_Achr6P10700_001 | Banana | nucleus | 47.22 | 53.12 |
| Solyc10g081490.1.1 | Tomato | nucleus | 49.31 | 52.59 |
| PGSC0003DMT400072272 | Potato | nucleus | 49.65 | 52.57 |
| GSMUA_Achr8P01400_001 | Banana | nucleus | 47.92 | 52.47 |
| CDY31125 | Canola | nucleus | 48.26 | 52.45 |
| Bra030743.1-P | Field mustard | nucleus | 48.26 | 52.45 |
| GSMUA_Achr9P17050_001 | Banana | nucleus | 50.69 | 52.33 |
| CDY32135 | Canola | nucleus | 47.92 | 51.69 |
| AT1G08810.1 | Thale cress | nucleus | 49.31 | 50.71 |
| GSMUA_Achr5P07720_001 | Banana | nucleus | 51.39 | 50.17 |
| Bra018598.1-P | Field mustard | nucleus | 48.96 | 50.0 |
| GSMUA_Achr6P02690_001 | Banana | nucleus | 43.4 | 50.0 |
| GSMUA_Achr7P21670_001 | Banana | nucleus | 48.96 | 48.79 |
| GSMUA_Achr7P18080_001 | Banana | nucleus | 45.14 | 48.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.49 | 45.49 |
| GSMUA_Achr11P... | Banana | nucleus | 39.58 | 45.42 |
| KRG94936 | Soybean | nucleus | 53.12 | 43.97 |
| VIT_08s0056g00800.t01 | Wine grape | nucleus | 48.61 | 43.61 |
| KRH64960 | Soybean | nucleus | 53.12 | 42.5 |
| GSMUA_Achr10P... | Banana | nucleus | 44.79 | 40.95 |
| CDX95031 | Canola | nucleus, plastid | 11.81 | 21.94 |
| GSMUA_Achr7P10550_001 | Banana | nucleus | 21.18 | 19.93 |
| GSMUA_Achr9P28330_001 | Banana | nucleus | 21.53 | 19.25 |
| GSMUA_Achr9P19380_001 | Banana | nucleus | 20.14 | 18.89 |
| GSMUA_Achr9P03320_001 | Banana | nucleus | 18.06 | 18.84 |
| GSMUA_Achr5P29070_001 | Banana | nucleus | 21.88 | 10.71 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P01620_001 | EnsemblPlants:GSMUA_Achr10T01620_001 | EnsemblPlantsGene:GSMUA_Achr10G01620_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF726 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0002969913 | UniProt:M0REI9 | MapMan:15.5.2.1 | : | : | : |
Description
Putative Myb-related protein 306 [Source:GMGC_GENE;Acc:GSMUA_Achr10G01620_001]
Coordinates
chr10:-:3827267..3828861
Molecular Weight (calculated)
31900.0 Da
IEP (calculated)
4.965
GRAVY (calculated)
-0.727
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCDNI GIKKGPWTPE EDIVLVSYIR EHGPGNWRSV PTSTGLMRCS KSCRLRWTNY LRPGIKRGNF TPHEERVIIH LQSLLGNRWA SIASYLPQRT
101: DNDIKNYWNT HLKKKINKIQ GAADADGKKP SSDARPDCHD YKSRYASSSE NISRLLQGSM QSSPTVNAPG KSKESCSTAD DDDDENSNII TALTAASLTE
201: NSQAEGDRGS CAPMTHDDFD LLHSFESMDT VPRENTGTET PFQPAEADDA EAQLGAESDQ PPLFLLENWL LDEASAQHLD IIEVVLAK
101: DNDIKNYWNT HLKKKINKIQ GAADADGKKP SSDARPDCHD YKSRYASSSE NISRLLQGSM QSSPTVNAPG KSKESCSTAD DDDDENSNII TALTAASLTE
201: NSQAEGDRGS CAPMTHDDFD LLHSFESMDT VPRENTGTET PFQPAEADDA EAQLGAESDQ PPLFLLENWL LDEASAQHLD IIEVVLAK
001: MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
101: DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ
201: GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT FIEKWLLEET STTGGQMEEM SHLMELSNML
Arabidopsis Description
MYB60MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.