Factsheet for HORVU6Hr1G071420.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G014460.1
HORVU1Hr1G050960.7
HORVU1Hr1G064640.3
HORVU3Hr1G090240.2
HORVU3Hr1G090250.5
HORVU4Hr1G013630.2
HORVU4Hr1G067960.4
HORVU5Hr1G124010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37630.1	HORVU0Hr1G014460.1	AT1G32230.1	19548978
AT2G37630.1	HORVU1Hr1G050960.7	AT1G32230.1	19548978
AT2G37630.1	HORVU5Hr1G124010.1	AT1G32230.1	19548978
AT2G37630.1	HORVU1Hr1G064640.3	AT1G65620.1	19228338
AT2G37630.1	HORVU3Hr1G090240.2	AT1G65620.1	19228338
AT2G37630.1	HORVU3Hr1G090250.5	AT1G65620.1	19228338
AT2G37630.1	HORVU4Hr1G067960.4	AT3G29390.1	16243907
AT2G37630.1	HORVU4Hr1G013630.2	AT5G66870.1	16243907

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G112000.2	Barley	extracellular, nucleus	67.39	42.03
HORVU5Hr1G021230.1	Barley	mitochondrion, nucleus	52.72	26.8
TraesCS5B01G086900.1	Wheat	mitochondrion, nucleus	52.17	26.45
TraesCS5A01G079100.1	Wheat	nucleus	48.91	26.24
TraesCS5D01G093100.1	Wheat	mitochondrion, nucleus	50.54	25.76
Os12t0572000-01	Rice	nucleus	39.13	21.05
EES17234	Sorghum	nucleus	43.48	21.0
Zm00001d030737_P001	Maize	nucleus	40.76	20.27
VIT_08s0007g00410.t01	Wine grape	nucleus	35.33	18.16
KRH49100	Soybean	nucleus	35.33	18.01
KRG99949	Soybean	nucleus	34.78	17.93
GSMUA_Achr7P10550_001	Banana	nucleus	29.35	17.65
Solyc09g010840.1.1	Tomato	nucleus	32.61	16.67
AT2G37630.1	Thale cress	nucleus	33.15	16.62
PGSC0003DMT400022771	Potato	nucleus	32.61	16.62
CDX91374	Canola	nucleus	32.07	16.53
Bra000011.1-P	Field mustard	nucleus	30.98	16.43
CDY07778	Canola	nucleus	30.98	16.43
CDX79747	Canola	nucleus	30.98	16.38
GSMUA_Achr9P28330_001	Banana	nucleus	27.72	15.84
Bra005177.1-P	Field mustard	nucleus	30.98	15.79
CDX74943	Canola	nucleus	30.98	15.57
KRG99521	Soybean	nucleus	28.26	14.77
KRH66092	Soybean	nucleus	28.26	14.57
GSMUA_Achr9P03320_001	Banana	nucleus	18.48	12.32
GSMUA_Achr5P29070_001	Banana	nucleus	28.8	9.01
HORVU5Hr1G123880.1	Barley	nucleus	8.7	5.67
HORVU7Hr1G077530.1	Barley	mitochondrion, nucleus	3.26	3.61
HORVU5Hr1G045540.1	Barley	nucleus	4.89	2.75
HORVU4Hr1G023510.2	Barley	nucleus	4.35	2.65
HORVU5Hr1G045550.1	Barley	nucleus	4.89	2.49
HORVU2Hr1G028470.1	Barley	nucleus, plastid	0.54	0.4

Protein Annotations

EnsemblPlants:HORVU6Hr1G071420.2	EnsemblPlantsGene:HORVU6Hr1G071420	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009987	GO:GO:0010338	InterPro:RS2/AS1	PANTHER:PTHR10641	PANTHER:PTHR10641:SF457
SEG:seg	UniParc:UPI000B46DCAE	UniProt:A0A287ULN6	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr6H:-:496570299..496571473

Molecular Weight (calculated)

19824.7 Da

IEP (calculated)

10.319

GRAVY (calculated)

-0.447

Length

184 amino acids

Sequence
(BLAST)

001: MAAHMLPPWM SSTATNGAPV SNAPLSPSIT LSLASVVTAP PAGAPWMQQQ QQQQQMAEDG AGFGFARPPP APGMVAEAPQ AALAELSGCC RELDEGHRAW
101: AAHRKEASWR LKRVELQLES ERACRPCILP TGRGRRRCCA SCARTAWEPR QSGPSRRAAS AAKSERWRLA ARDMALASSK DRIV

Best Arabidopsis Sequence Match ( AT2G37630.1 )
(BLAST)

001: MKERQRWSGE EDALLRAYVR QFGPREWHLV SERMNKPLNR DAKSCLERWK NYLKPGIKKG SLTEEEQRLV IRLQEKHGNK WKKIAAEVPG RTAKRLGKWW
101: EVFKEKQQRE EKESNKRVEP IDESKYDRIL ESFAEKLVKE RSNVVPAAAA AATVVMANSN GGFLHSEQQV QPPNPVIPPW LATSNNGNNV VARPPSVTLT
201: LSPSTVAAAA PQPPIPWLQQ QQPERAENGP GGLVLGSMMP SCSGSSESVF LSELVECCRE LEEGHRAWAD HKKEAAWRLR RLELQLESEK TCRQREKMEE
301: IEAKMKALRE EQKNAMEKIE GEYREQLVGL RRDAEAKDQK LADQWTSRHI RLTKFLEQQM GCRLDRP

Arabidopsis Description

AS1Transcription factor AS1 [Source:UniProtKB/Swiss-Prot;Acc:O80931]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.