CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92877
KRH33913

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	KRG92877	AT1G09030.1	17322342
AT3G59220.1	KRH33913	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01821	Soybean	plastid	87.69	87.96
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	73.23	80.95
VIT_05s0094g00610.t01	Wine grape	cytosol	24.62	74.07
PGSC0003DMT400031088	Potato	cytosol	67.08	73.65
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	22.46	73.0
Bra004746.1-P	Field mustard	plastid	65.85	72.3
CDY55513	Canola	plastid	65.54	71.96
Solyc09g098160.2.1	Tomato	mitochondrion	63.69	71.13
GSMUA_Achr9P01680_001	Banana	cytosol	64.92	71.04
Bra000289.1-P	Field mustard	cytosol	64.31	70.85
PGSC0003DMT400031070	Potato	mitochondrion	62.15	70.14
GSMUA_Achr10P...	Banana	cytosol	64.0	69.8
TraesCS4A01G336100.1	Wheat	nucleus	63.08	69.73
TraesCS5B01G535900.1	Wheat	plastid	63.08	69.73
TraesCS5D01G533400.1	Wheat	cytosol	62.46	69.05
GSMUA_Achr3P02460_001	Banana	cytosol	62.15	68.47
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	27.38	68.46
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	60.92	68.04
CDY17721	Canola	mitochondrion	40.92	67.86
CDY17946	Canola	mitochondrion	65.85	67.3
TraesCS5D01G533500.1	Wheat	plastid	62.15	67.11
Solyc09g098180.2.1	Tomato	plastid	67.69	66.67
CDY42802	Canola	mitochondrion	65.54	66.36
CDX83501	Canola	mitochondrion	64.62	65.62
GSMUA_Achr3P11020_001	Banana	cytosol	59.69	64.45
KRH14295	Soybean	cytosol	58.46	63.12
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	58.46	63.12
KRH46283	Soybean	mitochondrion	57.23	62.42
EER96962	Sorghum	cytosol	56.31	62.24
AT3G59220.1	Thale cress	cytosol	54.77	62.02
Zm00001d008595_P001	Maize	plastid	62.46	61.33
Os09t0484800-01	Rice	cytosol, mitochondrion	56.0	61.28
HORVU5Hr1G120790.2	Barley	cytosol	61.85	61.09
AT3G59260.1	Thale cress	cytosol	50.77	60.89
TraesCS4A01G335900.1	Wheat	plastid	55.08	60.88
Zm00001d020915_P002	Maize	cytosol	54.77	60.14
TraesCS5D01G270300.1	Wheat	cytosol	56.0	60.07
TraesCS5B01G261100.1	Wheat	mitochondrion	56.31	60.0
CDX67787	Canola	nucleus	49.85	59.78
HORVU5Hr1G072760.2	Barley	mitochondrion	55.38	59.41
TraesCS5A01G262700.1	Wheat	mitochondrion	56.62	58.6
CDX98356	Canola	cytosol	47.38	58.33
Os03t0845000-01	Rice	plasma membrane	64.62	58.17
KRG98621	Soybean	nucleus	40.31	57.71
AT2G43120.2	Thale cress	nucleus	65.85	57.53
CDY06015	Canola	cytosol	49.85	57.04
OQU90634	Sorghum	mitochondrion	62.46	56.86
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	17.23	56.57
CDX89016	Canola	nucleus	49.85	55.86
CDY57498	Canola	cytosol	47.69	55.76
TraesCS4A01G336200.2	Wheat	plastid	63.08	55.41
TraesCS5B01G535700.3	Wheat	plastid	62.77	55.28
TraesCS5B01G536000.2	Wheat	plastid	62.77	55.14
Bra014547.1-P	Field mustard	nucleus	48.92	54.83
TraesCS4A01G336000.2	Wheat	nucleus	55.69	54.68
TraesCS5D01G533100.1	Wheat	plastid	63.08	54.38
CDY06016	Canola	cytosol	44.62	54.31
TraesCS5B01G535800.1	Wheat	plastid	62.15	54.3
CDY00611	Canola	nucleus	48.0	53.98
HORVU5Hr1G120780.3	Barley	plastid	63.38	53.65
CDY57499	Canola	cytoskeleton, cytosol, nucleus	50.77	53.4
Zm00001d034829_P001	Maize	mitochondrion	61.54	52.77
Bra003367.1-P	Field mustard	cytosol	30.46	51.83
Bra007437.1-P	Field mustard	cytosol	31.08	51.53
Bra007438.1-P	Field mustard	cytosol	28.92	50.81
HORVU5Hr1G120800.4	Barley	plastid	62.77	45.95
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	27.69	44.78
Os08t0364900-00	Rice	plastid	46.15	42.61
TraesCS1B01G420000.1	Wheat	plastid	46.77	42.22
TraesCS1D01G400000.1	Wheat	plastid	45.54	41.11
TraesCS1A01G391900.1	Wheat	plastid	45.23	40.61
HORVU5Hr1G120810.1	Barley	plastid	30.77	40.16
EES14882	Sorghum	cytosol, plastid	43.08	37.04
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	44.92	36.68
VIT_09s0096g00380.t01	Wine grape	nucleus	15.08	35.0
Zm00001d032363_P001	Maize	cytosol	40.31	34.93

Protein Annotations

EMBL:ACUP02005362	EnsemblPlants:KRH46866	EnsemblPlantsGene:GLYMA_08G361100	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin
InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5
PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	ProteinID:KRH46866	ProteinID:KRH46866.1	SUPFAM:SSF51182
UniParc:UPI0002337E19	UniProt:A0A0R0J157	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:47272047..47274019

Molecular Weight (calculated)

36310.2 Da

IEP (calculated)

6.897

GRAVY (calculated)

-0.387

Length

325 amino acids

Sequence
(BLAST)

001: MRAISHHLSL LNWRISTSRS LFSLRNTCTN TMSQSDNSSP FTTPRLVLKK VLAKSQHEGD GAVVRRGIGR SELKNLDPFL MLDHFSVSPP AGFPDHPHRG
101: FETVTYMLEG GITHQDFAGH KGTIRAGDVQ WMTAGRGIIH SEMPAEANNN KGLQLWINLS SRDKMIEPNY QELPSENIAT AEKDGVEVRV IAGEAMGVHS
201: PVYTRTPTMY LVFSMMPKTQ WNQSIPESWN AFVYIIEGEG VFGSPTSSPT VPHHVLVLTQ GDGLSVWNNS SKPLRFVLIG GQPLNEPVVQ HGPFVMNTQS
301: EIENTIEDYH YGRNGFEMSK YWMSQ

Best Arabidopsis Sequence Match ( AT2G43120.2 )
(BLAST)

001: MAHNQFKDSL DPLSSINRHT ESQHQNTSKI RLLPRKATKK KKREEKTTLK YMRAAINRAN SLGGLFSFRF IRNIKSMSSS TSQDFVSRPV IKKVFAKLQK
101: EGDGAVVRRG ISRSEQKLLD PFLMLDEFSV SPPAGFPDHP HRGFETVTYV LEGGITHQDF KGHKGTIYAG DVQWMTAGRG IIHSEMPEEE VNKGLQLWIN
201: LSSNEKMIEP NYQELSHSDI PKAEQNGVEV KVIAGESMGI QSPVYTRTPT MFLDFTLQPG AQIHQNVPES WNAFAYILES GEGGGVFSSS NSSPIPAHSV
301: VVFGPGNDGV SVWNKSSSKQ LRFVLIAGEP IGEPVVQYGP FVMNTQAEID MTIEDYHYGK NGFEMAKYWR SQ

Arabidopsis Description

RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.