CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007438.1-P	Field mustard	cytosol	64.44	98.92
CDY57498	Canola	cytosol	92.96	94.96
CDX67787	Canola	nucleus	69.37	72.69
CDX98356	Canola	cytosol	67.25	72.35
CDY55513	Canola	plastid	63.73	61.15
CDY06016	Canola	cytosol	55.63	59.18
CDY00611	Canola	nucleus	59.51	58.48
CDX89016	Canola	nucleus	59.51	58.28
CDY42802	Canola	mitochondrion	65.49	57.94
CDY17946	Canola	mitochondrion	64.79	57.86
CDX83501	Canola	mitochondrion	65.14	57.81
CDY57499	Canola	cytoskeleton, cytosol, nucleus	61.27	56.31
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	57.39	55.44
PGSC0003DMT400031088	Potato	cytosol	55.99	53.72
EER96962	Sorghum	cytosol	54.93	53.06
VIT_05s0094g00610.t01	Wine grape	cytosol	20.07	52.78
Solyc09g098160.2.1	Tomato	mitochondrion	53.87	52.58
CDY17721	Canola	mitochondrion	36.27	52.55
PGSC0003DMT400031070	Potato	mitochondrion	53.17	52.43
Os09t0484800-01	Rice	cytosol, mitochondrion	54.58	52.19
GSMUA_Achr3P02460_001	Banana	cytosol	53.87	51.86
GSMUA_Achr3P11020_001	Banana	cytosol	54.93	51.83
Zm00001d020915_P002	Maize	cytosol	53.17	51.01
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	23.24	50.77
TraesCS5D01G533400.1	Wheat	cytosol	52.11	50.34
TraesCS5B01G535900.1	Wheat	plastid	52.11	50.34
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	51.41	50.17
TraesCS4A01G336100.1	Wheat	nucleus	51.76	50.0
GSMUA_Achr10P...	Banana	cytosol	52.46	50.0
KRH01821	Soybean	plastid	57.04	50.0
KRH46866	Soybean	plastid	57.04	49.85
GSMUA_Achr9P01680_001	Banana	cytosol	51.41	49.16
TraesCS5D01G533500.1	Wheat	plastid	51.76	48.84
TraesCS5B01G261100.1	Wheat	mitochondrion	52.11	48.52
TraesCS5D01G270300.1	Wheat	cytosol	51.41	48.18
HORVU5Hr1G072760.2	Barley	mitochondrion	51.41	48.18
Solyc09g098180.2.1	Tomato	plastid	55.63	47.88
TraesCS5A01G262700.1	Wheat	mitochondrion	51.41	46.5
Zm00001d008595_P001	Maize	plastid	53.52	45.92
TraesCS4A01G335900.1	Wheat	plastid	47.54	45.92
CDY22806	Canola	cytosol	50.0	45.66
CDY37125	Canola	cytosol	50.0	45.66
HORVU5Hr1G120790.2	Barley	cytosol	52.82	45.59
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	15.49	44.44
Os03t0845000-01	Rice	plasma membrane	55.28	43.49
OQU90634	Sorghum	mitochondrion	53.17	42.3
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	14.79	42.0
TraesCS4A01G336000.2	Wheat	nucleus	47.54	40.79
TraesCS5B01G535700.3	Wheat	plastid	52.46	40.38
TraesCS5B01G535800.1	Wheat	plastid	52.46	40.05
TraesCS5B01G536000.2	Wheat	plastid	52.11	40.0
Zm00001d034829_P001	Maize	mitochondrion	53.17	39.84
TraesCS4A01G336200.2	Wheat	plastid	51.76	39.73
TraesCS5D01G533100.1	Wheat	plastid	52.11	39.26
Os08t0364900-00	Rice	plastid	47.54	38.35
TraesCS1B01G420000.1	Wheat	plastid	48.59	38.33
HORVU5Hr1G120780.3	Barley	plastid	51.76	38.28
TraesCS1A01G391900.1	Wheat	plastid	48.24	37.85
TraesCS1D01G400000.1	Wheat	plastid	47.54	37.5
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	48.59	34.67
HORVU5Hr1G120800.4	Barley	plastid	52.82	33.78
EES14882	Sorghum	cytosol, plastid	44.37	33.33
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	23.59	33.33
Zm00001d032363_P001	Maize	cytosol	43.31	32.8
HORVU5Hr1G120810.1	Barley	plastid	24.3	27.71
VIT_09s0096g00380.t01	Wine grape	nucleus	7.75	15.71

Protein Annotations

EnsemblPlants:CDY06015	EnsemblPlantsGene:GSBRNA2T00121860001	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin	InterPro:Pirin_C_dom
InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF02678
PFAM:PF05726	PIRSF:PIRSF006232	ProteinID:CDY06015	ProteinID:CDY06015.1	SUPFAM:SSF51182	UniParc:UPI0004EE243E
MapMan:35.1	:	:	:	:	:

Description

BnaA09g37650D

Coordinates

chrLK031967:-:231466..232859

Molecular Weight (calculated)

31648.2 Da

IEP (calculated)

4.887

GRAVY (calculated)

-0.302

Length

284 amino acids

Sequence
(BLAST)

001: MSSRQVVKKI FANFENSNDG VIRQGITKSD HELLDPFVSL AEFSVSPPGG FRDHPHRGFE SVTYMLEGGL IHQDFNGNKG TVHEGDVLWT TAGRGIIHSE
101: MPKEHTNIGL QLWVNLPSSD KMIDPANVEI SNSEMPVAYE EGVEVKVIAG VSMGVQSPFY TRIPMMFLDI TLQPRSQTHQ TIPESWTAFA YVLDGNEGVF
201: GSSDSYAVQA HTLVVFGTGD EVSVWNTSNY RPLRFLLIAG EPIGESVVQH GPFVMNTQAE IDRTIWDYRN GQNGFEMAKH WRSD

Best Arabidopsis Sequence Match ( AT3G59260.1 )
(BLAST)

001: MKVMVLSLGK ASPSKSDHEL LDPFVSLVEF SVSPPGGFKD HPHRGFESVT YMFQGGIIHQ DCNGNKGTIH EGDVQWMTAG RGIIHSEMPE EQVNKGLQLW
101: INLPSSAKMI EPKNIEISSS EIPSADDYGV EVKVIAGESM GVKSPFYTKT PIMFLDFTLD PKAQTHQAVP ESWTAFAYIV EGDEGVFSSS DSSTVQAHNV
201: VVFGTGDEVS VWNTSNSRPL RFLLIAGEPI GEPVVQHGPF VMNSQDEIEM TIGDYRNGMN GFEMAKHWRS E

Arabidopsis Description

Putative pirin-like protein At3g59260 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX45]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.