Factsheet for Zm00001d020915_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d042197_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	Zm00001d042197_P001	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96962	Sorghum	cytosol	93.24	93.88
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	39.53	90.0
Os09t0484800-01	Rice	cytosol, mitochondrion	86.15	85.86
TraesCS5D01G270300.1	Wheat	cytosol	85.47	83.5
HORVU5Hr1G072760.2	Barley	mitochondrion	85.47	83.5
TraesCS5B01G261100.1	Wheat	mitochondrion	85.47	82.95
TraesCS5A01G262700.1	Wheat	mitochondrion	85.14	80.25
GSMUA_Achr3P11020_001	Banana	cytosol	75.68	74.42
PGSC0003DMT400033425	Potato	mitochondrion	69.59	70.31
KRH14295	Soybean	cytosol	70.95	69.77
VIT_19s0090g01530.t01	Wine grape	cytosol	69.93	69.46
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	70.27	69.1
KRH46283	Soybean	mitochondrion	66.89	66.44
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	66.22	63.23
PGSC0003DMT400031088	Potato	cytosol	63.18	63.18
VIT_05s0094g00610.t01	Wine grape	cytosol	22.97	62.96
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	62.5	62.93
KRG98621	Soybean	nucleus	47.64	62.11
Solyc12g014590.1.1	Tomato	mitochondrion	68.58	62.08
CDY22806	Canola	cytosol	65.2	62.06
CDY37125	Canola	cytosol	65.2	62.06
PGSC0003DMT400031070	Potato	mitochondrion	59.8	61.46
Bra018859.1-P	Field mustard	cytosol	64.53	61.41
Solyc09g098160.2.1	Tomato	mitochondrion	60.14	61.17
Bra000289.1-P	Field mustard	cytosol	59.8	60.0
Bra004746.1-P	Field mustard	plastid	58.78	58.78
CDY55513	Canola	plastid	58.11	58.11
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	19.26	57.0
Zm00001d008595_P001	Maize	plastid	63.18	56.5
Solyc09g098180.2.1	Tomato	plastid	62.84	56.36
CDX83501	Canola	mitochondrion	60.47	55.94
AT3G59220.1	Thale cress	cytosol	53.72	55.4
CDY42802	Canola	mitochondrion	59.8	55.14
CDY17946	Canola	mitochondrion	59.12	55.03
KRH46866	Soybean	plastid	60.14	54.77
KRH01821	Soybean	plastid	59.8	54.63
CDY17721	Canola	mitochondrion	36.15	54.59
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	18.24	54.55
CDY06015	Canola	cytosol	51.01	53.17
AT3G59260.1	Thale cress	cytosol	48.65	53.14
CDY57498	Canola	cytosol	48.65	51.8
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	51.35	51.01
CDX89016	Canola	nucleus	49.66	50.69
Solyc07g065160.2.1	Tomato	mitochondrion	51.01	50.67
CDX67787	Canola	nucleus	46.28	50.55
Zm00001d034829_P001	Maize	mitochondrion	64.19	50.13
CDX98356	Canola	cytosol	44.59	50.0
Bra014547.1-P	Field mustard	nucleus	48.65	49.66
CDY06016	Canola	cytosol	44.26	49.06
Bra007438.1-P	Field mustard	cytosol	30.41	48.65
CDY00611	Canola	nucleus	46.96	48.1
CDY57499	Canola	cytoskeleton, cytosol, nucleus	49.32	47.25
Bra007437.1-P	Field mustard	cytosol	31.08	46.94
AT2G43120.2	Thale cress	nucleus	58.78	46.77
Bra003367.1-P	Field mustard	cytosol	29.39	45.55
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	29.73	43.78
Zm00001d032363_P001	Maize	cytosol	50.34	39.73
VIT_09s0096g00380.t01	Wine grape	nucleus	12.5	26.43

Protein Annotations

EMBL:BT035101	EnsemblPlants:Zm00001d020915_P002	EnsemblPlants:Zm00001d020915_T002	EnsemblPlantsGene:Zm00001d020915	EntrezGene:100192968	Gene3D:2.60.120.10
InterPro:IPR014710	InterPro:Pirin	InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	ProteinID:ONM55806.1
SEG:seg	SUPFAM:SSF51182	UniParc:UPI00017B6703	UniProt:B4FDB3	MapMan:35.1	:

Description

Pirin-like protein 2

Coordinates

chr7:+:136479777..136482266

Molecular Weight (calculated)

32595.0 Da

IEP (calculated)

6.588

GRAVY (calculated)

-0.246

Length

296 amino acids

Sequence
(BLAST)

001: MEKPRQVARK FLARPQHEGA GAVVRRSIGR FELRYFDPFL VLDEFTVSAP AGFPDHPHRG FETVTYMLEG AVTHEDFEGH RGTIKAGDVQ WMTAGRGIVH
101: SEMPAGPGTS RGLQLWVNLS SANKMVEPGY QEIQSKDIAC TSDGDGGVTV RVIAGHAMGV RSPVRTRTPT MYLDFTVRPR GAVRQPVRAS WNAFAYVLEG
201: EGVFGAERCA PVGAHHLLLL GHGDGLEVWN KLPDRPLRFL LVAGEPIGEP VAQLGPFVMN TEEEIDMTVN DFECYANGFE KARHWKSQAM LALGVE

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.